Gene Symbol: sumo1 Gene Name: SMT3 suppressor of mif two 3 homolog 1 Synonyms: ubl1, sumo-1, xsumo1, xsumo-1, dap1, gmp1, pic1, smt3, ofc10, senp2, smt3c Add Xenopus synonyms Gene Function: small ubiquitin-like modifier Interactants: ube2i(7) , ranbp2(4) , rangap1(4) , sumo2(4) , nup153(2) , pias4(2) , ran(2) View All

Molecules		tropicalis	laevis a		laevis b
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene		Entrez Gene
mRNA		Refseq >NM_001005111|Xenopus (Silurana) tropicalis SMT3 suppressor of mif two 3 homolog 1 (sumo1), mRNA GACACCTTCCTTGTCTGGTTCTCTTGTGCTGTTATTGTGCCCGGAGGAAGGAAAAGCGTAGAGCGGTCCAGTGTAGCGAACCGATACCGGCCGAGAGCAGTTAGCATGTCTGATCAGGAAGCTAAACCATCTAGCGAGGATCTAGGAGACAAAAAAGAAGGAGGGGATTATATCAAACTCAAAGTCATCGGACAGGATAGCAGTGAAATTCACTTTAAGGTAAAGATGACAACGCATCTCAAAAAGCTGAAAGAGTCATACTGTCAGAGACAGGGTGTTCCAATGAATTCTCTCAGGTTTTTGTTTGAAGGGCAAAGAATCTCAGATCACCAGACTCCTAAGGAGCTCGGTATGGAGGAAGAGGATGTTATTGAAGTTTATCAGGAACAGACTGGGGGCCACTCGACAATTTAAATTTTTCCCTCACCTTCGTTTTTTTTTTTTTTTTAATTATTATTTTTTTTACTTTTTTTTTTTTTTTGTAATGTTTACCTCTCCTTCCCCTTGGTACTCTGTTTCCTTTCATGTAATCAGCCAGATGTCTGTGGCATCTAGATCACCTCATTTTAATATCTTCATCAGTATGAGAAGTCACTTCTGAAGATGTCACCAGTCCAGGCTGTTTTAGCTTCACTCCTTTTGGTCTCCAAGAATATTGATTTGAATTTACATTGTAAAATTACTCGGTTGCTTGGGACACGAAAAAGAACGTTTTTTGGGGATTTATTGCACTTCAAATTGTTGAATAAAATTTTCACCATTACTGTTATCGTTCCACCTGCCTAGAAGATATAGGAGTTGTGTTTTTAGATACAAGTTGTCATGCAACCACCCCCTATGAAATGTTCGCTGTATCTTTTATTTTTGTGGGGCATGGGTTTTAAAAAAAAGTAGAAAAAAAAAATAAAAAAAAAAAAAAAA	Refseq >NM_001090248|Xenopus laevis SMT3 suppressor of mif two 3 homolog 1 (sumo1-a), mRNA ACGAAAAAGCGTAGAGCCGTCAGTGCAGCGAACAGATACCGGCGGAGAGCAGTGAGCATGTCTGATCAGGAAGCGAAACCATCTAGCGAGGATCTAGGAGACAAAAAAGATGGAGGGGATTATATCAAACTCAAAGTCATTGGACAGGACAGCAGTGAAATTCACTTCAAGGTAAAGATGACAACGCATCTTAAAAAGCTGAAAGAGTCATACCGTCAGAGACAGGGCGTTCCAATGAATTCTCTCAGGTTTTTGTTTGAAGGGCAAAGAATCTCAGATCACCAGACTCCTAAGGAGCTCGGAATGGAGGAAGAGGATGTTATTGAAGTTTATCAGGAACAGACTGGGGGCCACTCGACATTTTAAATTCTCTCTCTCTCTCTCCCTCCATTTTTTTTTTTTTAATTATTATTATTTTGTACTTTTTTTTTTTTTTTTTTTGTAATGTTTACCTCTCCTTCCCCTT		Refseq >NM_001096805|Xenopus laevis SMT3 suppressor of mif two 3 homolog 1 (sumo1-b), mRNA ATCGAATTCCCCGGGGCGAACCGAGACCGGCGGAGAGCAGTGAGCATGTCTGATCAGGAAGCTAAACCATCTAGTGAGGATCTAGGAGACAAAAAAGAAGGAGGGGATTATATCAAACTCAAAGTCATCGGGCAGGACAGCAGTGAAATTCACTTCAAGGTAAAGATGACAACGCATCTCAAAAAGCTGAAAGAGTCATATTGTCAGAGACAGGGCGTTCCAATGAATTCTCTCAGGTTTTTGTTTGAAGGGCAAAGAATCTCAGATCACCAGACTCCTAAGGAGCTCGGAATGGAGGAAGAGGATGTTATTGAAGTTTATCAGGAACAGACTGGGGGGCACTCGACAATTTAAATTTTCACTCACCCTCCATTTATTTTTTAATTATTATTTTATACTTTTTTTTTTTTTTTTTGGTAATGTTTACCTCTCCTCCCCACTTGGTACTCTGTCTCCTTTCATGTTATCAGCCAGATGTCTGTGGCACCTATATCATCATTATCTTCATTAGTATGAGAAAAGTTGCATCGGAAAATCTCCCCAGTCCAGACCATTTTTTTCTTCACCTATTGGTCTTCAAGGATATTGGTTGGAATTTACATTCTAAAATGACTTGGTTGCTTGAGACACGAGGAGAGTATATGCCGGGGATTTAGGAAGAAGTACGTTTTTTGGGGGAATTCTTGCACTTCAGATCATTGAATAAACCGTTCACCATTACTGTTATCGTTCCAGCGCCTGCCTAGAAGATGTAGGAGTTGTGTTTTTAGATACAAGTTGTCATGCAACCACCCCTTATGAAATGTTCGCTGTATCTTTTATTTTTGGGGGGCATGGGTTTTAAAAAAAGAAAAAATTTAAAAAAAAATACTTGTCTGTATTGGCTTAATTCAAGTTGAAGTTATATTAAAAAAAGCAAAAACATTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001005111|small ubiquitin-related modifier 1 precursor [Xenopus (Silurana) tropicalis] MSDQEAKPSSEDLGDKKEGGDYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRISDHQTPKELGMEEEDVIEVYQEQTGGHSTI UniProtKB	Refseq >NP_001083717|small ubiquitin-related modifier 1-A precursor [Xenopus laevis] MSDQEAKPSSEDLGDKKDGGDYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYRQRQGVPMNSLRFLFEGQRISDHQTPKELGMEEEDVIEVYQEQTGGHSTF UniProtKB		Refseq >NP_001090274|small ubiquitin-related modifier 1-B precursor [Xenopus laevis] MSDQEAKPSSEDLGDKKEGGDYIKLKVIGQDSSEIHFKVKMTTHLKKLKESYCQRQGVPMNSLRFLFEGQRISDHQTPKELGMEEEDVIEVYQEQTGGHSTI UniProtKB

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase
Synteny		Metazome

Expression		tropicalis	laevis a		laevis b
UniGene		Str.21615	Xl.57160		Xl.76066 [+] Xl.38355 Xl.69910
Unigene EST Profile		EST Profile	EST Profile		EST Profile
GEO data			GEO		GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	SUMO1
mouse		MGI	Sumo1	All(7) Gene Trapped(2) Targeted, knock Out(1) Targeted, other(2)
zebrafish		ZFIN	sumo1

Publications
First:		Molecular cloning of the human CAK1 gene encoding a cyclin-dependent kinase-activating kinase. [Oncogene 1994]
Most recent:		SUMO modification of NZFP mediates transcriptional repression through TBP binding. [Mol Cells 2012]
		View All Papers 3 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:
Biological:		protein modification process
Cellular Component:
EC:
KOG:		[O] Ubiquitin-like proteins

Reagents		tropicalis	laevis a		laevis b
Clones		open biosystems	open biosystems		open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes		geneservice/RZPD imagenes
Affymetrix 1.0		Str.21615.1.S1_at			Xl.7960.1.S1_at
Affymetrix 2.0					Xl2.36379.1.S1_at

Symbol legend[+]

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