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Summary Expression Gene Literature (4) GO Terms (0) Nucleotides (5160) Proteins (36) Interactants (602) Wiki
XB-GENEPAGE-984491
Gene Symbol:
ccdc50

Gene Name:
coiled-coil domain containing 50

Synonyms:
ymer ( Add synonyms , Nomenclature history )

Gene Function:
C-type lectin

Protein Function :


InterPro :
CTDL fold , C-type lectin CS , C-type lectin-like/link sf , C-type lectin-like [+]

Interactants:
Loading ...

Diseases: 


Disease Ontology:
autosomal dominant nonsyndromic deafness [+]

OMIM:
DEAFNESS, AUTOSOMAL DOMINANT 44; DFNA44

External Links:
1/3
 
Xenbase Gene ID XB-GENE-984492 XB-GENE-984496 XB-GENE-17332013
Gene Symbol ccdc50 ccdc50.L ccdc50.S
Chromosome Chr5 chr5L Scaffold86
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 100380052
100049085
108705272
mRNA NCBI Nucleotide NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More.. NCBI Protein NCBI Protein  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine ccdc50 ccdc50.L ccdc50.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC, AGR, Monarch, OMIM, GeneCards CCDC50 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Ccdc50 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Ccdc50 Ensembl
zebrafish
ZFIN, AGR ccdc50a ZFIN Ensembl
chicken
GEISHA CCDC50 Ensembl
fruit fly
Publications
First Gene expression screening in Xenopus identifies molecular pathways, predicts gene function and provides a global view of embryonic patterning., Mech Dev 1998                                                              
Most Recent Transcriptome profiling reveals male- and female-specific gene expression pattern and novel gene candidates for the control of sex determination and gonad development in Xenopus laevis., Dev Genes Evol 2019          
All View All Papers 1 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 0 term 0 term 0 term
PANTHER ccdc50
KEGG Pathways
KOG [TV] C-type lectin
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks ccdc50
ORFs ccdc50.L ORF1
Clones Horizon Source BioScience Horizon Source BioScience Horizon
Plasmids Addgene Addgene

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