Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (1) GO Terms (3) Nucleotides (94) Proteins (24) Interactants (54) Wiki
XB-GENEPAGE- 986007

Gene Symbol: lsm8

Gene Name: LSM8 homolog, U6 small nuclear RNA associated

Synonyms: lsm8/naa38
Add Xenopus synonyms , Nomenclature history


Gene Function: Small Nuclear ribonucleoprotein splicing factor

Protein Function:


Interactants: YYY

OMIM Disease Associations:
 
Xenbase Gene ID XB-GENE-986008 XB-GENE-17330457 XB-GENE-986009
Gene Symbol lsm8 lsm8.L lsm8.S
Chromosome Chr03 chr3L chr3S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 8.0 JBrowse 8.0 GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide Refseq
Protein NCBI Protein Refseq TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v8.0 gene model
GBrowse
laevis genome v9.1 gene model
GBrowse
laevis genome v9.1 gene model
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.10238 Xl.43193
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 14 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine lsm8 lsm8.L lsm8.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards LSM8 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Lsm8 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN lsm8 ZFIN Ensembl
chicken
GEISHA LSM8 Ensembl
fruit fly
worm
WORMBASE
Publications
First: Xenopus LSm proteins bind U8 snoRNA via an internal evolutionarily conserved octamer sequence. [Mol Cell Biol 2002]
Most recent:
View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 0 term 0 term 3 terms
EC
PANTHER lsm8
KEGG Pathways K12627
KOG [A] Small Nuclear ribonucleoprotein splicing factor (alt_id KOG:1784)
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience
ORF naa38 ORF1
Affymetrix 1.0 Str.10238.1.S1_at [+]
Affymetrix 2.0 Xl2.6859.1.S1_at [+]

Symbol legend[+]

My Xenbase: [ Log-in / Register ]
version: [4.5.0]

Major funding for Xenbase is provided by the National Institute of Child Health and Human Development, grant P41 HD064556