[provisional- machine annotated only] Gene Symbol: trpv1 [Predicted: Source is Human Entrez Gene] Gene Name: transient receptor potential cation channel, subfamily V, member 1 [Predicted: Source is Human Entrez Gene] Add Xenopus synonyms Gene Function: Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) Interactants: trpm8(11) , trpv4(8) , trpv2(7) , trpv3(7) , trpa1(6) , trpv5(2) , trpv6(2) View All

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		NCBI Nucleotide >XM_002938253|PREDICTED: Xenopus (Silurana) tropicalis transient receptor potential cation channel subfamily V member 1-like (LOC100487208), mRNA CAACTGTCGAAACATCAGGATTTTCCTGGAGTGAGCAGCCTTTATCTCTGGATCTACTGATCATTTGGATATGGAGTTTTCAGTTAAGTTCCATGAAAATGAAGAAAATGGGAAGTTCCACAGATATTGATGAAACTGAAGAGACTTGTGCATCTGTTGAAACTGACGAATCCCACAGTGATGACACCAATCGCAGCACGCAGGAGAACAGAAAGAAGCTAAAGTTTTGCCAGGCAAAGTATTCAATCTTTAGCTCACCCAAACCAAAGGGCCGTCGCTTTGGGAAGGCAGAGACAGATCGTAATATCGCTCCTATGGACTCTGTGTACCAGATAGAAAGTAAAGTGATGTCTCCAACAATTAAGTTTCAACGCAATCTGGAAAAGGGAAAATTATGTAATCAGCTGGTCAGGCAAAGTTCATCTTTGGAATCCACAACGAGCTGCAAGGACAGAACGTTTAAACTGTACGACCAGAGAAGGATTTTTGATGCAGCTGCCTATGGTGACTGTGATGAACTGGATGATCTCCTGGTTTATCTGCTTAGGACGCATAAAAAGCTCACCAATGAAGAGTTTAAAGAGAAAGAGACGGGGAAAACCTGCCTGCTGAAAGCCATGCTCAATTTGGAAAACGGGATGAACAGCACAATCCCATTGTTTCTGGAAATTGCAGAAAAAACAGATAATATAAAAGAATTCATAAATTCAGCTTATAGAGACAACTACTACAGGGGTCAGACAGCCCTGCATATTGCCATTGAAAGAAGGAATATGGATCTGGTTGAGCTTTTATTGCAGCATGGAGCTGACGTCCATGCCAGGGCGGATGGGGAATTCTTCAGAAAAGCCAAAGGAAAAGCCGGTTTCTATTTCGGGGAGCTGCCTCTGTCCCTGGCAGCATGCACCAATCAGACAGCTATGGTCCAGTACCTCTTACAGAACCAGTACTCTCCAGCCAATATGGCAGCCAAAGACACATTTGGAAACACAGTACTGCACGCCCTGGTAGACATTGCCGACAACACTCAGGAGAACACGACTTTTGTGACCAAAATGTACAATGAGATACTGGTGTTGGGGGCTCAGATAAGGCCTTCATTGAAGCTGGAGGAAATTATGAATAAAAAGGGCCTCACCCCTTTGTCCTTGGCAGCAAAAACAGGCAAGATTGGGGTTTTTGCCTATATTCTGAGGAGAGAAATTAAGAATTTCGAGTGCAGACATCTTTCTCGGAAATTCACAGAATGGGCATACGGGCCGGTGCATTCCTCCCTCTATGATTTATCAGGAGTAGATACCTATGAGAAGAACTCTGTGCTTGAAATCATTGCCTACAGCAGTGAGACGCCGAATCGCCACGAGATGCTGTTGGTGGAGCCTCTTAACAAACTGTTACAAGACAAATGGGACCGATTTGTTAAGCGAATATTTTACTTTAACTTCTTGGCTTACATTACATACGTTATCATCTTTACCGTAGCTGCCTACTACAGACCTGTTGATGGAAGTCCTCCATTCCCAGTACAGCCTAACAGCTATCTCCGCACCTGTGGCGAGCTAATCACCGTTATTGGAGGAATCTATTTCTTTTTCAGAGGTATCCAGTATTTTACACAGAGACGTCCATCCCTGAAGGCTTTGATTGCTGACAGCTACTATGAATTTCTGTTCTTTGCCCAGTCTATATTCCTTCTCTTATCCACCATGCTATACTTCTGTGGAAGAAATGAATATGTGGCCTTCTTGGTGATCTGTTTAGCAATGAGCTGGGCCAATGTGCTGTACTACACGAGGGGCTTTCAGCTGATGGGCATATATTCTGTTATGATAGAGAAGTTAATTCTAAGCGACATGGTCCGGTTTATGTTTGTCTACCTTTTGTTCCTTTTTGGATTTGCAGCAGCTCTGGTGACCCTCATTGAAGATGGAGAGGGCAGAACAGACCTCAATAGTACATGTGGAAGGCGCTGCTGCAAACCCGAGCCTGCTTCTTACAACAACCTCTACTACACCTGCCAGGAACTCTTTAAGTTTGCCATTGGAATGGGAGATCTGGAATTTACAGACAACTACAAATACAAGCCCGTGTTCATCTTCCTGCTGATCACATATGTCATTCTAACATACATCCTCCTGCTCAATATGTTAATAGCGCTGATGGGGGAAACAGTAAGCAAGGTCGCTCAGGAAAGTAAAAGTATCTGGAAGCTTCAGAGAGCAATTACCATACTGGACATTGAGAAGAGCTTTCTGAACTCCTTCAGAGACACATTCAGATCAGGAAAGTCAGTCCTTGTAGGATTTACTCCTGATGGCAAAGAGGATTACAGATGGTGCTTTAGAGTCGATGAAGTGAATTGGAACAAATGGAACTCAAATTTAGGAATAATCAAGGAGGACCCAGGGAACTGCCATGGATTAAAAAGCACCCTCAGTGCTTCATTCCGACCTAGTCACATTTCAGGGAAAAGATGGAAGTCATTGGTCCCACACGTAAAAGAAACAAATGTGAAAATTGACAATGAAACAGTACCGGAGGAAATTCCGTTACAGCAAAAACCTACTTTGGCAGATCAGACAGTGCCAGAAGAAGATCAGGAAGTGACATCCAAGGCAGAGTGA	Refseq >NM_001190393|Xenopus laevis transient receptor potential cation channel, subfamily V, member 1 (trpv1), mRNA ATGAAGAAAATGGGCAGTTCCACCGATATCGATGAAACCGAAGAGACTTGTGCTTCGATTGAAACCGACGAATCCCACAGTGATGACACCAATCGCAGTGCACAGGAGAACAGGAAGAAGCTAAAGTTTTGCCAGGCCAAGTATTCCATCTTTAGCTCCCCCAAACCAAAAGGCCGTCGCTTTGGGAAGACAGAGACGGATCGGGATATGGCTCCTATGGACTCTGTGTACCAGATAGAAAGTAAAGTCATATCTCCAGCCATTAAGTTTCATCGCAATTTGGAAAGAGGAAAACTATGCAATCAGCTGGTGAGGCAAAGTACATCTTTGGAATCTACCAGCAGCTGTAAGGACAGAACGTTTAAACTGTATGACCAGAGAAGGATTTTTGATGCGGCTGCCTATGGGGACTGTGAAGAACTTGATGATCTCCTGGTTTATCTGCTGAGGACACATAAACGGCTCACCAATGAAGAGTTTAAAGAGAAAGAGACGGGGAAAACCTGCCTGCTGAAAGCCATGCTGAATTTAGATAAAGGGATGAACCACACAATCCTATTATTTCTGGAAATTGCAGAAAAGACGGATAATTTAAAAGAATTCATCAATTCTGCTTATAGAGACAACTACTACAGAGGTCAGACAGCCCTGCACATTGCCATCGAAAGAAGGAATATGGATCTGGTTCAGCTTTTGTTGCAACACGGCGCTGATGTCCATGCCAGGGCAGATGGGGAATTCTTCAGAAAAGCCAAAGGAAAGGCTGGTTTCTATTTTGGGGAGCTGCCTCTGTCCCTAGCAGCGTGCACCAATCAGACAGCGATAGTCCGATACCTCCTGCAGAACCAGCACTCTCCAGCCAATATTGCTGCCAGAGACTCATTTGGAAACACAGTTCTTCATGCCCTGGTAGACATTGCCGACAACACTCAGGAGAACACGGCATTTGTGACTAAAATGTACAATGAGATCCTGGTGCTGGGTGCTCAGATTAAGCCTTCACTGAAGATAGAGGAGATTGCAAATAAAAAAGGACTCACCCCTTTGTCCTTAGCTGCAAAAACTGGCAAGATTGGGGTTTTTGCCTATATTCTGAGGAGAGAGATTAAGAATTTAGAGTGCAGACATCTCTCTCGAAAATTCACAGAATGGGCATATGGGCCGGTCCATTCCTCCCTCTATGATCTGTCAGGAGTAGACACCTATGAGAAGAACTCTGTCCTTGAAATCATTGCCTACAGCAGTGAGACGCCGAATCGCCATGACATGCTATTGGTGGAGCCTCTTAACAAACTGTTACAAGATAAATGGGACCACTTTGTTAAGCGCATATTCTACTTTAACTTCTTCGCGTACATCATATATGTTATCATCTTTACTATAGCTGCCTACTACAGACCTGTCGATGGAAGTCCTCCATTCCCAGTACAATATGGCAGCTATCTCCGCACCTCTGGCGAGTTAATCACAGTCATTGGAGGAATCTATTTCTTTTTCAGAGCTATCCAGTACTTTACACAGAGACGACCGTCCTTGAAGGCTTTGCTTGCTGACAGCTACTGTGAATTTCTGTTCTTTTCCCAGTCTGTCTTCCTCCTGTTATCCACCGTACTATACTTCTGTGGAAGGAATGAATATGTAGCTTTCTTGGTGATCTGTTTAGCAATGAGCTGGGCCAATGTGCTGTACTACACCAGGGGCTTCCAGCTGATGGGCATTTATTCTGTTATGATTGAGAAGTTAATTCTGAGCGACATGGTCCGGTTCCTGTTTGTCTACCTTTTGTTTCTTTTTGGGTTTGCTGCAGCTCTGGTGACCCTCATTGAAGATGGAGAGGGCAGAACAGACGTGAATAATACATGCGGGCGGCGCTGCTGCAAACCCGAACCTGCCTCCTACAACAACCTCTACTACACCTGCCAGGAACTCTTTAAGTTTGCCATTGGAATGGGAGATCTGGAATTTACAGACAACTACAAATACAAGCCCGTGTTCATCTTTCTGCTCATTACCTATGTTATTTTAACATACATTCTCCTGCTTAATATGTTAATAGCCCTGATGGGGGAAACAGTAAGCAAGGTTGCTCAGGAAAGTAAAAGTATCTGGAAACTGCAGAGAGCAATTACCATACTGGACATTGAGAAAAGCTTTCTGAACTCCTTCAGAGACACATTCAGATCAGGAAAATCGGTCCTTGTAGGAATTACACCCGACGGCAAGGAGGATTACAGATGGTGCTTTAGAGTCGATGAAGTGAACTGGAACAAATGGAACTCAAACTTGGGTATAATCAAGGAGGACCCTGGGAACTGTCATGGATTTAAAAGCACCCTCAGTGCGTCATTCCGACCTAGAGGGAGAAGGTGGAGGTCGTTGGTCCCTCACATAAAAGAAATAAATTTGGGAAATGAAAATGAGACAGTTCCGGAGGAAGTTCCGTTACAGATACAACCTGCTTTGTCAGTTCAGACGGTGAAAGAAGAAGATCAGGAGGTGACATCCAAGGCTGAGTGA
Protein		NCBI Protein >XP_002938299|PREDICTED: transient receptor potential cation channel subfamily V member 1-like [Xenopus (Silurana) tropicalis] MKMKKMGSSTDIDETEETCASVETDESHSDDTNRSTQENRKKLKFCQAKYSIFSSPKPKGRRFGKAETDRNIAPMDSVYQIESKVMSPTIKFQRNLEKGKLCNQLVRQSSSLESTTSCKDRTFKLYDQRRIFDAAAYGDCDELDDLLVYLLRTHKKLTNEEFKEKETGKTCLLKAMLNLENGMNSTIPLFLEIAEKTDNIKEFINSAYRDNYYRGQTALHIAIERRNMDLVELLLQHGADVHARADGEFFRKAKGKAGFYFGELPLSLAACTNQTAMVQYLLQNQYSPANMAAKDTFGNTVLHALVDIADNTQENTTFVTKMYNEILVLGAQIRPSLKLEEIMNKKGLTPLSLAAKTGKIGVFAYILRREIKNFECRHLSRKFTEWAYGPVHSSLYDLSGVDTYEKNSVLEIIAYSSETPNRHEMLLVEPLNKLLQDKWDRFVKRIFYFNFLAYITYVIIFTVAAYYRPVDGSPPFPVQPNSYLRTCGELITVIGGIYFFFRGIQYFTQRRPSLKALIADSYYEFLFFAQSIFLLLSTMLYFCGRNEYVAFLVICLAMSWANVLYYTRGFQLMGIYSVMIEKLILSDMVRFMFVYLLFLFGFAAALVTLIEDGEGRTDLNSTCGRRCCKPEPASYNNLYYTCQELFKFAIGMGDLEFTDNYKYKPVFIFLLITYVILTYILLLNMLIALMGETVSKVAQESKSIWKLQRAITILDIEKSFLNSFRDTFRSGKSVLVGFTPDGKEDYRWCFRVDEVNWNKWNSNLGIIKEDPGNCHGLKSTLSASFRPSHISGKRWKSLVPHVKETNVKIDNETVPEEIPLQQKPTLADQTVPEEDQEVTSKAE	Refseq >NP_001177322|transient receptor potential cation channel, subfamily V, member 1 [Xenopus laevis] MKKMGSSTDIDETEETCASIETDESHSDDTNRSAQENRKKLKFCQAKYSIFSSPKPKGRRFGKTETDRDMAPMDSVYQIESKVISPAIKFHRNLERGKLCNQLVRQSTSLESTSSCKDRTFKLYDQRRIFDAAAYGDCEELDDLLVYLLRTHKRLTNEEFKEKETGKTCLLKAMLNLDKGMNHTILLFLEIAEKTDNLKEFINSAYRDNYYRGQTALHIAIERRNMDLVQLLLQHGADVHARADGEFFRKAKGKAGFYFGELPLSLAACTNQTAIVRYLLQNQHSPANIAARDSFGNTVLHALVDIADNTQENTAFVTKMYNEILVLGAQIKPSLKIEEIANKKGLTPLSLAAKTGKIGVFAYILRREIKNLECRHLSRKFTEWAYGPVHSSLYDLSGVDTYEKNSVLEIIAYSSETPNRHDMLLVEPLNKLLQDKWDHFVKRIFYFNFFAYIIYVIIFTIAAYYRPVDGSPPFPVQYGSYLRTSGELITVIGGIYFFFRAIQYFTQRRPSLKALLADSYCEFLFFSQSVFLLLSTVLYFCGRNEYVAFLVICLAMSWANVLYYTRGFQLMGIYSVMIEKLILSDMVRFLFVYLLFLFGFAAALVTLIEDGEGRTDVNNTCGRRCCKPEPASYNNLYYTCQELFKFAIGMGDLEFTDNYKYKPVFIFLLITYVILTYILLLNMLIALMGETVSKVAQESKSIWKLQRAITILDIEKSFLNSFRDTFRSGKSVLVGITPDGKEDYRWCFRVDEVNWNKWNSNLGIIKEDPGNCHGFKSTLSASFRPRGRRWRSLVPHIKEINLGNENETVPEEVPLQIQPALSVQTVKEEDQEVTSKAE

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase
Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.38608	Xl.85899
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	TRPV1
mouse		MGI	Trpv1	All(5) Targeted, knock Out(2)
zebrafish			trpv1

Publications
First:		Heat-evoked activation of the ion channel, TRPV4. [J Neurosci 2002]
Most recent:		GABAA receptor modulation by piperine and a non-TRPV1 activating derivative. [Biochem Pharmacol 2013]
		View All Papers

Functional Ontologies
GO: Molecular:		cation channel activity ion channel activity
Biological:		cation transport ion transport
Cellular Component:		integral to membrane membrane
EC:
KOG:		[PT] Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family)

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.38608.1.A1_at [+] StrEns.6346.1.S1_at
Affymetrix 2.0

Symbol legend[+]

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