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Summary Expression Gene Literature (1) GO Terms (3) Nucleotides (233) Proteins (15) Interactants (4) Wiki
XB-GENEPAGE- 998855

Gene Symbol: col6a1

Gene Name: collagen, type VI, alpha 1

Synonyms:
Add Xenopus synonyms , Nomenclature history

Gene Function: Collagens (type IV and type XIII), and related proteins

Protein Function:
Collagen VI acts as a cell-binding protein.


Interactants: Loading ...

OMIM Disease Associations: BETHLEM MYOPATHY [+]
 
Xenbase Gene ID XB-GENE-998856 XB-GENE-998859 XB-GENE-17330860
Gene Symbol col6a1 col6a1.L col6a1.S
Chromosome Chr09 chr9_10L chr9_10S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 8.0 JBrowse 8.0 GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0 GBrowse 9.1 JBrowse 9.1
Entrez Gene
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide Refseq NCBI Nucleotide
Protein NCBI Protein Refseq Swiss-Prot TrEMBL NCBI Protein TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Xl.9863 [+]
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Experimental regulation Regulation heatmap:
Images 1 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine col6a1 col6a1.L col6a1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards COL6A1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Col6a1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN col6a1 ZFIN Ensembl
chicken
GEISHA COL6A1 Ensembl
fruit fly
worm
WORMBASE
Publications
First: Confocal imaging of early heart development in Xenopus laevis. [Dev Biol 2000]
Most recent:
View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 0 term 3 terms 0 term
EC
PANTHER col6a1
KEGG Pathways K06238 K06238
KOG [W] Collagens (type IV and type XIII), and related proteins
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience
Antibody Col6a1 Ab1 Col6a1 Ab1
ORF col6a1 ORF1
Affymetrix 1.0 StrJgi.302.1.S1_s_at [+] Xl.9863.1.S1_at
Affymetrix 2.0 Xl2.9863.1.S1_at

Symbol legend[+]

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