alg1 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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XB-GENEPAGE-1006361

[provisional- machine annotated only] Gene Symbol: alg1 [Predicted: Source is Human Entrez Gene] Gene Name: asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog [Predicted: Source is Human Entrez Gene] Synonyms: hmt1, hmat1 Add Xenopus synonyms Gene Function: Interactants:

XB-GENE-1006362

XB-GENE-1006367

Molecules		tropicalis	laevis
Gene		JGI XT Genome 4.1 Ensembl
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001030435\|Xenopus (Silurana) tropicalis MGC108323 protein (MGC108323), mRNA CGCAAAGCAACAAAAATGGCGTGCTTAAGGAAGCCCATATTGCTTGCAGTAGCTTTGTTCTTTGGCACCGTGACTTTATGTGGTGCTAGGTTTATATATTGCTTTCTAGTTCTTCCTCTGTTACTTGCGCTATTGCTTGCTTGGACTGATGATCCGAAAGGTAACAAGCGGATATGTGTGCTAGTTCTTGGAGACATCGGCCGTAGCCCACGGATGACGTATCACGCGCTGTCATTGGCTCGCCATGGTTTTTTTGTGACGCTTACAGGCTTCCGTGTAGGTCCTTCCAACGGACACGAGGGCACCCACTCCGTTTAGAAGAAGGGAGGTTCCATTTAAACATTCGGAAAGGATTTTTTACAAAACTGAACCCCATAGAGATCTCTTACATCATGAAAGAATAAATATTCAGCCGGTTTCTGAATTTAGAATGCTTAAAGTTGGTCCACGGATGTTTCAGTACTTTATTAAGGTGATTGTGCAGGCTTTTCAGCTTTTTTACATATTACTCAAGATTGATCCCCTTTCTTATATCATTCTTCAGAATCCACCAGGCTTGCCTAGTATTGCAGTTACGTGGTTGTTTTGTGTTCTGAGAAGGAGCCAGCTCATAATTGACTGGCATAACTATGGCTATTCAATCATGAGCCTGACAAATGGACCAAAGCATCCAATTGTGCGAATTGCAAAATGGTATGAAAAAGTGTTTGGACGTCTGTCTGACTACAACTTTTGTGTAACAAACGCAATGAAGGAGGACTTAATGGTCAACTGGAACATCAAAGCTGCTACTCTCTATGATAAGCCTGCCTCAATTTTTCAAGAAACTCCAATTGAAATGCAGCACAAGTTATTCATGAAACTTGCAAAGGAGTATCCGCCATTCAAATATCCGTCACAATCGAAATGCTCAGGCACTGAAAAAACTGCTTTTACGGAATTAAAACTGGAAAAAGGCACCATTAGCTTCAATAAGGAATGCCCTGCATTATTAATCAGTAGTACAAGCTGGACAGAGGATGAAGACTTTTCAATATTACTGAAAGCACTGGAAGAGTATGAATTGTTTATTAGAAATGGAGCTAAACTTCCACCACTTGTATGTGTTATAACAGGAAAGGGGCCTTTAAAAGAACACTACAGCAAGCTAATTAGAGAGATGCAGTTCAAGAACATCCAGATTTGCACACCATGGTTGGAGGCAGAAGATTATCCTCTTTTATTGGGATCTGCTAATCTGGGAGTGTGTCTCCATAAATCATCCAGTGGTCTGGACCTTCCTATGAAAGTGGTGGATATGTTCGGTTGCTGTCTTCCTGTTTGTGCAATTAATTTTAAATGTTTACAAGAACTCGTAAAACATGGAGAAAACGGTTTAATATTCAAAGATTCACTAGAGCTTGCGGAACAATTAAAGGATATGTTTACAGATTTTACAAGTAAGTCAAGCAAATTGAAAAGATTTCAACAAAATCTTCGAGAATCTGTACAAACACGATGGGATGAAACCTGGGATCAGATTGTTCTACCAGTAATTACAGAAAACTATAAGACATAAATGCAGCATTACATAGAACTTCTTCTCTTCCTTTATGTGTTGCTGTAAGACTGCATGCCAAAATGTAAAATTGGAAAGAACAGAAAAACCTGCTCAGTTAAAAAAAGTGAAAATTGTAGGTCTCGGTTTTTTATGGTAAAGGGGCAGGCAATACAGTGAAGTGAGAGATTTGATGAATTGTTACTGGTCATGTGCATAAATGGATGGCAATTTAATAAACTTGGAACAAACTTTCTGTACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	Refseq >NM_001097775\|Xenopus laevis hypothetical protein LOC100037043 (LOC100037043), mRNA AAAATGGCGTGTGTTAGGAAGCTCATATTGCTTGCGGTAGTTTTGTCCTGTGGCACTGCGGCTTTATGCGGTGCTAGTTTTTTAAACTACATACTGTTCCTCTGTGTGCTGCCCGCGCTATTGCTTGCTTGGACTGATAATCCGAAAGGTAACAAGCGGATTTGCGTGCTTGTTCTTGGAGACATCGGCCGTAGCCCGCGGATGACGTATCACGCGCTGTCATTGGCTCGGCATGGGTTTTTTGTGACCCTTGCAGGCTTCCGTGAATCTGAACCCCATAGAGAGCTCTTACATCATGAAAGAATAAATATTCAGCCAATTTCTGAATTTAGAATGTTTAAAGTTGGCCCACGGATGTTTCAGTACTTTGTTAAGGTGATTGTTCAGGCTTTTCAGCTTTTTTACATATTACTGAAGATTGATCCCCTTTCATATATCATTCTTCAGAATCCTCCAGGCTTGCCTAGTATTGCAGTTACGTGGTTGTTTTGTGTTCTAAGAAGGAGCCAACTCATAATTGACTGGCATAACTATGGCTATTCAATCATGAGCCTGACAAATGGACCAAAGCATCCAATTGTGCGAATTGCAAAATGGTATGAATATGTGTTTGGGCGTCTGTCTGATTATAACTTTTGTGTGACTAATGCAATGAAGGATGACTTAATGGTTAACTGGAACATCAAAGCTGCTACTCTCTATGATAAGCCTGCCTCCATTTTTCGAGAAACTCCGATTGAAATGCAGCACAAATTATTCATGAATCTTGCAAAGGAGTATCCACCATTTAGATATCAGTCACAATCTAAATGCTCAGGCACTGAAAAAACTGCTTTCACTGATTTAACCCTGGAAAATGGTGCTGTTAACTACAACAAGGAGCGCCCTGCATTATTAATCAGTAGTACAAGCTGGACAGAGGATGAAGACTTTTCAGTATTACTGAAAGCACTGGAAGAGTATGAATTGTATATTCGAAATGGAGCCAAACTTCCATCACTTGTTTGTGTTATAACAGGAAAGGGGCCTTTAAAGGAACACTACAGTCGGCTAATTAAAGAGATGCAGTTTAAGAACATCCAGATTTGCACACCATGGTTGGAGGCAGAAGATTATCCACTTTTATTGGGATCGGCTGATCTGGGAGTGTGTCTCCACAAGTCATCCAGTGGCCTGGACCTTCCAATGAAAGTGGTGGATATGTTTGGTTGCTGTCTTCCTGTTTGTGCAATTAAATTTAAATGTTTACATGAACTTGTAAAACATGAAGAAAATGGTTTAATATTTGAAGATGCACTAGAGCTTGCTGAACAATTAAAGGATATGTTTACGGATTTTACGAGTAAGTCAAGCAAACTTAATAGATTTCGACATAATCTCAGTGAATCTGTACAAATACGCTGGGATGAATCCTGGGACCAGATTGTTCTACCGCTGATCACAGAAAACTGTAAAACTTAGCTGCGGCATTGCATAGAACTGTTACTCTGCCTCCATGTTTTGGATGCTGTAAGACTGCATGCAGAAAACTAGAACCCGCTGAGATCAAGTGGAAATCGTAGGTTCTACAGTCAACACATTACACTGTGAAAGATCCGATGAATGTGTTTCTTCTTGTTACTGGTCACGTGCATAAATATACTGTATATTTTTTATTTGGATGGTAGTAATTTAATAAAATTATTCTTGGACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001025606\|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog [Xenopus (Silurana) tropicalis] MLKVGPRMFQYFIKVIVQAFQLFYILLKIDPLSYIILQNPPGLPSIAVTWLFCVLRRSQLIIDWHNYGYSIMSLTNGPKHPIVRIAKWYEKVFGRLSDYNFCVTNAMKEDLMVNWNIKAATLYDKPASIFQETPIEMQHKLFMKLAKEYPPFKYPSQSKCSGTEKTAFTELKLEKGTISFNKECPALLISSTSWTEDEDFSILLKALEEYELFIRNGAKLPPLVCVITGKGPLKEHYSKLIREMQFKNIQICTPWLEAEDYPLLLGSANLGVCLHKSSSGLDLPMKVVDMFGCCLPVCAINFKCLQELVKHGENGLIFKDSLELAEQLKDMFTDFTSKSSKLKRFQQNLRESVQTRWDETWDQIVLPVITENYKT	Refseq >NP_001091244\|asparagine-linked glycosylation 1, beta-1,4-mannosyltransferase homolog [Xenopus laevis] MACVRKLILLAVVLSCGTAALCGASFLNYILFLCVLPALLLAWTDNPKGNKRICVLVLGDIGRSPRMTYHALSLARHGFFVTLAGFRESEPHRELLHHERINIQPISEFRMFKVGPRMFQYFVKVIVQAFQLFYILLKIDPLSYIILQNPPGLPSIAVTWLFCVLRRSQLIIDWHNYGYSIMSLTNGPKHPIVRIAKWYEYVFGRLSDYNFCVTNAMKDDLMVNWNIKAATLYDKPASIFRETPIEMQHKLFMNLAKEYPPFRYQSQSKCSGTEKTAFTDLTLENGAVNYNKERPALLISSTSWTEDEDFSVLLKALEEYELYIRNGAKLPSLVCVITGKGPLKEHYSRLIKEMQFKNIQICTPWLEAEDYPLLLGSADLGVCLHKSSSGLDLPMKVVDMFGCCLPVCAIKFKCLHELVKHEENGLIFEDALELAEQLKDMFTDFTSKSSKLNRFRHNLSESVQIRWDESWDQIVLPLITENCKT

Genomic

tropicalis

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Synteny

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Expression		tropicalis	laevis
UniGene		Str.30983	Xl.24756
Gurdon EST/FL		XZT3892	IMAGE:5085180
Affymetrix 1.0		Str.30983.1.S1_at	Xl.24756.1.S1_at
GEO data			GEO

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene	ALG1	OMIM:608540
mouse		MGI	Alg1	All(2) Targeted, other(2)
zebrafish		ZFIN	alg1

Publications
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Functional Ontologies
GO: Molecular:		1,2-dihydroxy-phenanthrene glycosyltransferase activity 1-phenanthrol glycosyltransferase activity 9-phenanthrol UDP-glucuronosyltransferase activity More[+] 9-phenanthrol glycosyltransferase activity DNA binding UDP-N-acetylglucosamine-peptide N-acetylglucosaminyltransferase activity UDP-glucose:glycoprotein glucosyltransferase activity acetylgalactosaminyltransferase activity acetylglucosaminyltransferase activity alpha(1,3)-fucosyltransferase activity alpha(1,6)-fucosyltransferase activity alpha-1,2-mannosyltransferase activity alpha-1,3-mannosyltransferase activity alpha-1,6-mannosyltransferase activity beta-1,4-mannosyltransferase activity cellulose synthase activity dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity fucosyltransferase activity galactosyltransferase activity glucosyltransferase activity glycolipid mannosyltransferase activity lipopolysaccharide-1,6-galactosyltransferase activity mannosyltransferase activity oligosaccharyl transferase activity phenanthrol glycosyltransferase activity transferase activity, transferring hexosyl groups
Biological:		biosynthetic process
Cellular Component:		nucleus
EC:		Hexosyltransferases
KOG:		[O] Beta-1,4-mannosyltransferase

Suppliers		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice	geneservice
		RZPD imagenes	RZPD imagenes

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