ddt Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (3)

Interactants (9)

XB-GENEPAGE-976098

[provisional- machine annotated only] Gene Symbol: ddt [Predicted: Source is Human Entrez Gene] Gene Name: D-dopachrome tautomerase [Predicted: Source is Human Entrez Gene] Synonyms: dopachrome tautomerase, ddct Add Xenopus synonyms Gene Function: Interactants: dct(2) , f10(2) , fam110a(2) , prg4(2) , th(2) , amh(1) , ednrb(1) View All

XB-GENE-976099

XB-GENE-6254136

XB-GENE-6255328

Molecules		tropicalis	laevis a		laevis b
Gene		JGI XT Genome 4.1 Ensembl
		Entrez Gene	Entrez Gene		Entrez Gene
mRNA		Refseq >NM_001017261\|Xenopus (Silurana) tropicalis D-dopachrome tautomerase (ddt), mRNA CCCGGGGGGAATTATGCCATTCGTGGAGCTGGACACTAACCTGCCGCCGCAACAAGTACCCCAGGACTTGGCGGAGAAGCTCTGCTCAGCTACTGCTACCATTCTGAGCAAACCAAGGGAGAGGGTAAATGTGACTGTGAGGACTGGAGTCTCCATGGTAGTGGGAGGTTCATGTGCACCATGCACCCAACTGCTTGTCTCCTCTATCGGAGTGGTGGGAACAGCAGAACAGAACAAAGAACACAGTGCTAAGTTCTTTCAGTTCCTGACAGAAAACATGGGCCTTGAACAGGACAGGATTTTGCTGAGGTTTGTTCCATTAGAGCCATGGCAGGTTGGAAAAAAAGCAACAGTCATGACGTTTCTATAACTTCTCAAGAAGTTAGAGACCACAACTGCACAGAATCACCATATCCATCTCTACTATGACCAAGATACCGAGTGTACAGCCATCTGTATGCTACATGTCACCTGATATTACACAAGCTGTAAAAAAATTATCACAGTCCCTCCAAAAAAGGGGTCCGAACAAAACAGATTAATTTGCAAGGTTAATCGGAACCCATTTTAGCCACCCAACCAAAAATCTCATGCTTTCTTTCTGGGTAAAAGACAAACACCATACTGTTCAGTGTACTTGATGGAACTAGTTGAGCTGCTGTATATTTTACTGAATTGCAACCTGCAGCTGTCCACAGACACAGCTATAGTATCAAGTAGATACAAGTCTAAAGCAGTTAAGTAGTAATAAGTATTCTTGAAAAATGCTTCAACAATTATCTGTGAACTGAAGAAGCGACTTGGATAACTGGTGAAATGTTTTTAAGATTACATAGCAAAGTCCGTTGATTTAGTCATATCTGTACTTGATAACCATCTATCATGCTTTCTTGGTGTGGTCTGCAATACATGTTTTCTCTGACTTATGAAAGGCAACAAGACTGTCTACTCTGAAGTTGCATTCCATGATGTATTTTTGGTAAATAAAAGTCATTATGAATAAAAAAAAAAAAAAAAAA	Refseq >NM_001093982\|Xenopus laevis D-dopachrome decarboxylase a (ddt-a), mRNA GAGAAAGGAAGAATAATGCCGTTTGTAGAGCTGGAAACAAATCTGCCTTCTCAAAATGTACCCCAGGACCTGGCAGAGAAGCTCTGCTCAGCCACCGCTACCATTCTGGGCAAACCAAGGGAGAGGGTAAATGTGACAGTGAGGACTGGAGTCTCCATGGTAGTGGGAGGTTCTTCAGCGCCATGCACCCAGCTGTTTATCTCCTCTATTGGAGTGGTGGGAACTGCAGAACAGAACAAGGAACACAGCGCTAAATTCTTTAATTTCCTGACAGAACAACTGGGCCTTGCACAGGACAGGATTTTGCTGAGATTTGTGCCAATAGAGCCATGGCAGATTGGAAAAAATGGAACTATTATGACTTTTCTATAACTTCTCATAAGAAATTAGAGGCCACGGCTGCACAGAATCATCATATCCATCTCTACTCTAATCAAGATACTGAGTGTACAGTCATCTGTATGCTATATGTCACCTGACAAGACACAAGCCATAGCATAAAAAGCATTGTCTTCACAAAAAAAGAGTCTGAACACCACAGATTGTTTTACAGTGAATTGCTCTTCTAGAGATCAAACAGGCAGCAACCCATTTTAAGTTTCAAAAATGTCATGCTTTCATTTTGTGCCAGAGACAAACACAACAGTACTCTGTATTCCTGATGGAACTAATGGAGCTGTAGTATATGTCACTGAATGACAAATTGATCATTCTGAGTGTATTGTCCTCTTTCCTTCACAGACAGTTTTTGTAGAGGCAGAGGAAAGCAGATCCGCTCTTATGTGCACAACCCCATAGGTCCATCAGCATGTGTGGAGCTACATGGAGCGTATATTGGCGGAAAGATGCACATGCATGCTTTTTTGTGTCTATCTGTTCCATGTAGTGGCGGTGAGCACATTAGAGTGAATCTGATTTCCACTGTCTCTGTGAAGACGCCTGTGGAGGAAAGGGGACAATCTGCTTAGTGTGCCCTTGGTCTAAGGCCTACAGATTTCCACTAACACATTTTCTGTAAATTGTATCAAGTCTTTCTTGCCTGGGGTGATCAGTATTACATCTTTTCTCTCTGACTAATGAAAGGCAACAGGGTTGTCTGCTTTAAGGTCACATTCCATGATGCTCAGGCCCTTGTATTTCAAGGACAGACAGGACCAAATGGCCTCCAACAGGCCCAATAAATAGTGACTGTCTATGGCATATTATTATCTGCAGTGCCTGTGGCATTTGCCAATAACCAATTTCTATCTGGTGGGAGTGCAGTGGCCATAGCTACCGGCTATCTCTCAAGAAATGAGATCCATCACACTTGTCCTTTAGACAAGTCCATAATATATTGCCATAGTCCATATTTTTGTGTGAGTCAATTTTCTGCTTGAAATCTAAATACATAGTACACTTAAACTGATCCTGTGTATTTAGTAAGTGATTTACTGAAAAATAAACATTGCTGGTGTGTGAGGCTCAGGCCAGACTGTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA		Refseq >NM_001094566\|Xenopus laevis D-dopachrome tautomerase (ddt-b), mRNA CGGACGCGTGGGGCAAGAGAAGGGAAGCACTATGCCGTTTGTAGAGCTGGACACTAACCTGCAGCAGCAGGAAGTACCCCAGGACCTGGCTGAGAAGCTCTGCTCAGCCACTGCTACCATTCTGGGAAAACCAAGGGAGAGGGTAAATGTGACAGTGAGGACTGGAGTCTCTATGGTAGTGGGAGGTTCATCAGCTCCATGCACCCAGCTGATCATTTCCTCTATTGGAGTGGTGGGAACTGCAGAACAGAACAAGGAACACAGTGCTAAGTTCTTTAATTTCCTGACAGAACAATTGGGCCTTGCGCAGGACAGGATTTTGCTGAGGTTTGTGCCGTTAGAGCCATGGCAGATTGGAAAAAATGGAACCGTCATGACTTTTCTATAACTTCTCATAAGAAGTTAGAGGCCACGACTGCACAGAATCATCATATCCATCTCTAATGTGATCAAGATATTGACAGTCATAGCATACATAAACCTGGTCTCCACAAAAAAAAAAAAGAGTCCAATACCACAGATTAATTTACAGTGAATTTCTCTTTTGGAGATCAAACACAGCAACCCATGTTAAGCTTATTTAAACAAAAATGTCATGCTTTCATTTTGAGACTAACACCACAGTCATGGGCGTAACTACAGAGGAAGCAGACCCTGCGGCTGCAGGGGGCCCAGGAGGTATAGGGGGCCCCATGAGGCTCAAATTCATACAATTTCAATACATTTTGGTAAAACAGGACAACCTCTGGATATGTTTGGGGCCCTAAAATTAATTTGCTGTGGGGCCCAGTAACATCTAGTTAAGCCACTGACCACAGTACTCAGTGTTCCTGATGGAACTAATTGAACTGCAGTATATTTCACTGAATGACATTGTCCACTTTTTTCCACAGACTGGAGGAGGGCGGATCTGCTCTTATGTGCACACCCCCATAGGTCTATATTGACAGGCCCGGCCTCAGAGGAGCATATATTGGCACAAAAACAGAAATGTATGCATTTTGTGCCCCGTGTAATTCCACACATGCCTGTTAATGGACCTATGTGGATGTGCACATAGGAGCGGATCCGCTTTCCAACTTCTCTATAAAAATGCCCGCAGAGGAAATTGCACAATCCACTTAGTATGCACTAAGGCCTGCACAGACACATTCACTGCGAGTAGTATAGAGTAGAGATACATTTAAGGCAGATAAGCGGAGATACGTATTCTTAAATGTTTCACCACTTATTCAAGAACTGAAGAAGTTGCTTTGATAAGTGGTAAAATGTTCATGATTACACAGTAGGTCCAATTGGTTTAGACTTATTTCTACCTGTTATCGTAGATCATGTCCTGAATGAATGAATATCTTCATAGACATGAATAGAAACGTCCTTATTTGGGGTGATCACCATTAAATGTTTTCTCTCTAACTGATGAAGGGCAACAAGGTTGTCGGCTTTAAAGTCACATTCCATGATGTATTTTTGGTAAATAAAAACAAGTCATCAAAAATAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001017261\|D-dopachrome decarboxylase [Xenopus (Silurana) tropicalis] MPFVELDTNLPPQQVPQDLAEKLCSATATILSKPRERVNVTVRTGVSMVVGGSCAPCTQLLVSSIGVVGTAEQNKEHSAKFFQFLTENMGLEQDRILLRFVPLEPWQVGKKATVMTFL UniProtKB	Refseq >NP_001087451\|D-dopachrome decarboxylase a [Xenopus laevis] MPFVELETNLPSQNVPQDLAEKLCSATATILGKPRERVNVTVRTGVSMVVGGSSAPCTQLFISSIGVVGTAEQNKEHSAKFFNFLTEQLGLAQDRILLRFVPIEPWQIGKNGTIMTFL UniProtKB		Refseq >NP_001088035\|D-dopachrome decarboxylase-B [Xenopus laevis] MPFVELDTNLQQQEVPQDLAEKLCSATATILGKPRERVNVTVRTGVSMVVGGSSAPCTQLIISSIGVVGTAEQNKEHSAKFFNFLTEQLGLAQDRILLRFVPLEPWQIGKNGTVMTFL UniProtKB

Genomic

tropicalis

Genome Browser

Synteny

Xenbase G-Browse

GBrowse

Expression		tropicalis	laevis a		laevis b
UniGene		Str.57256	Xl.23562		Xl.45032
Gurdon EST/FL		CABE12385	XL080k05
Affymetrix 1.0		Str.10934.1.S1_at	Xl.23562.1.S1_at		Xl.14122.1.A1_at
GEO data			GEO		GEO

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene	DDT
mouse		MGI	Ddt	All(1) Targeted, knock Out(1)
zebrafish		ZFIN	ddt

Publications
First:		Melanization stimulating activity in the skin of the gilthead porgy, Sparus auratus. [Pigment Cell Res 1993]
Most recent:		Timeline and distribution of melanocyte precursors in the mouse heart. [Pigment Cell Melanoma Res 2008]
		View All Papers

Functional Ontologies
GO: Molecular:
Biological:
Cellular Component:
EC:
KOG:		[V] Macrophage migration inhibitory factor

Suppliers		tropicalis	laevis a		laevis b
Clones		open biosystems	open biosystems		open biosystems
		geneservice	geneservice		geneservice
		RZPD imagenes	RZPD imagenes		RZPD imagenes

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