[provisional- machine annotated only] Gene Symbol: atp5d [Predicted: Source is Human Entrez Gene] Gene Name: ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit [Predicted: Source is Human Entrez Gene] Add Xenopus synonyms Gene Function: Mitochondrial F1F0-ATP synthase, subunit delta/ATP16 Interactants:

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001016516|Xenopus (Silurana) tropicalis ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit (atp5d), nuclear gene encoding mitochondrial protein, mRNA CACAGTCAAGCCGGCTTCACCATGCTGTCTGCCCGTGCTCTCTTCGCTCTCCGCCGGGCTGTATTTAGCCAGGTTCGGACATATGCCGAAGCAGCTCCTGCGGGGGCCCCTGCCATGAGTTTCACATTCGCTTCCCCGACTCAGGTTTTCTACAGTGGTGCCAGTGTGAAACAGGTAGATGTACCCACATTGACAGGAATGTTTGGGATTCTCCCAGCCCATGTCCCAACTCTACAGGTTCTCAGGCCAGGCATTGTAACAGTGTTCAGTGATGATGGTGGTGCAACTAAATATTTTGTGAGCAGTGGTTCAGTAACAGTAAATGCAGACTCTTCTGTGCAACTCCTGGCTGAAGAGGCAGTGACACTGGACATGTTAGACCTTAGTACTGCAAAGTCAAACTTGGAAAAGGCACAGGCAGAGCTGCAGAGCGCTGGAGATGAAGCTGCAAAAGCAGAGGCTCTTATTAATGTTGAAGCTAGTGAAGCTATTGTCAAAGCCCTGGAATGAACAGGGTTTGTGTAGCTGTAATGTATGACACCAAGGACCCACCTACCACCACCTTGACCAAAATAAAAAGTTAAATACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	Refseq >NM_001093815|Xenopus laevis ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit (atp5d), nuclear gene encoding mitochondrial protein, mRNA GGGGGGTATCCGGTGCCCTTGCGTTCGGTCACAGTCAAGCCGGCTTAATCATGCTGTCTGCCCGTGCTCTCTTTGCTCTCCGCCGGGCTGTATTTAGCCAGGTTCGGACATATGCCGAAGCAGCTCCCGCGGGGGCTCCCGCCATGAGCTTCACGTTCGCTTCCTCGACTCAGGTTTTCTACAGTGGTGCCAGTGTGAAACAGGTTGATGTACCCACATTGACAGGAATGTTTGGCATTCTCCCAGCCCATGTCCCAACTCTACAAGTTCTCAGGCCAGGCCTTGTAACGGTGTTCAGTGATGATGGTGTTGCAACTAAATATTTTGTGAGCAGTGGTTCAGTAACGGTGAATGCAGACTCTTCTGTGCAGCTCCTGGCTGAAGAGGCAGTGACACTGGACATGTTAGACCTTAGTACTGCAAAGTCAAACTTGGAAAAGGCACAGGCAGAGCTACAAAGTGCTGGAGATGAAGCGGCAAAAGCAGAGGCTCTAATTAATGTTGAAGCTAGTGAGGCTATTGTCAAAGCCCTGGAATAAACAGGATTTGTGTACCGTACCACCAACGACCCACCTACCACCACCTTGACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001016516|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit [Xenopus (Silurana) tropicalis] MLSARALFALRRAVFSQVRTYAEAAPAGAPAMSFTFASPTQVFYSGASVKQVDVPTLTGMFGILPAHVPTLQVLRPGIVTVFSDDGGATKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLSTAKSNLEKAQAELQSAGDEAAKAEALINVEASEAIVKALE	Refseq >NP_001087284|ATP synthase, H+ transporting, mitochondrial F1 complex, delta subunit [Xenopus laevis] MLSARALFALRRAVFSQVRTYAEAAPAGAPAMSFTFASSTQVFYSGASVKQVDVPTLTGMFGILPAHVPTLQVLRPGLVTVFSDDGVATKYFVSSGSVTVNADSSVQLLAEEAVTLDMLDLSTAKSNLEKAQAELQSAGDEAAKAEALINVEASEAIVKALE

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase
Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.10780 [+] Str.62640	Xl.23716
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	ATP5D
mouse		MGI	Atp5d	All(2) Targeted, other(2)
zebrafish		ZFIN	atp5d

Publications
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Functional Ontologies
GO: Molecular:		hydrogen ion transporting ATP synthase activity, rotational mechanism hydrogen ion transporting ATPase activity, rotational mechanism hydrogen-transporting two-sector ATPase activity
Biological:		ATP synthesis coupled proton transport
Cellular Component:		proton-transporting two-sector ATPase complex
EC:		H+-transporting two-sector ATPase
KOG:		[C] Mitochondrial F1F0-ATP synthase, subunit delta/ATP16

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.10780.1.S2_at [+] Str.10780.1.S1_at	Xl.23716.1.S1_at
Affymetrix 2.0			Xl2.23716.1.S1_at

Symbol legend[+]

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