sumo3 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (1)

Nucleotides (895)

Interactants (6)

XB-GENEPAGE-1004210

Gene Symbol: sumo3 Gene Name: SMT3 suppressor of mif two 3 homolog 3 Synonyms: smt3a, smt3h1, sumo-3 Add Xenopus synonyms Gene Function: ubiquitin-like modifier Interactants: nup153(1) , ranbp2(1) , rangap1(1) , sumo1(1) , sumo2(1) , ube2i(1) , View All

XB-GENE-1004211

XB-GENE-1004218

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001004853\|Xenopus (Silurana) tropicalis SMT3 suppressor of mif two 3 homolog 3 (sumo3), mRNA GGAGAGCTAGAAAAGGGCAATCATGTCTGAAGAGAAACCCAAGGAAGGTGTGAAGACAGAGAATGACCACATCAACCTGAAAGTGGCAGGGCAGGATGGATCTGTGGTTCAGTTCAAAATAAAAAGGCACACACCACTCAGCAAGTTAATGAAAGCTTACTGCGACAGACAGGGCCTATCAATGCGGCAGATAAGGTTCAGGTTTGATGGACAACCAATCAATGAAACAGACACACCTGCACAGCTGGAGATGGAAGATGAAGATACCATTGATGTGTTCCAACAACAGACAGGTGGTGTGTGCTAAGCACTGAACAAGTTCAATCTCCAGTATGGCAGGAGCTCAAATTCCCTCCATATGCCTCATTTCTCACCTATGCCCCTTGGATTTGCTGTTAAATAGTTAACACAGAACAAACATGCTGATCACACGACACTTCTGAAAACGTTGGCGGACTCTCCCAGGGATGATATTCAATCAGAAATGCAGTTTTCTTTTCCAGCTGAACGTGCCAGAAGTTGTAAAGTGGGCCAATCTAGAGCATTGTCTTTCTCTGCTGAAAGTTTTCAGGCTTTTTTGTGCAGTACTGTTTGTTTACAGCAGTTCTGTTTAGTTTTTCCCTCTGTATCTTCAGATGTAAATAATTGGATCCTTGCTTGAGTAATTTTTGAGCCAGTTCCATGCCAGAGTGTGTGGTTTTGCATATTCTCTGACATGCAAACAGTAAATGCTTGCCCACACAGGCAACTGAAAGATGTGAAAATTAAGGTTGTTATACCAGTAATGGCAGATGGGAGGGAGGGGATATGCTTTTATTTGCTAAAATGTTTCATTTGAACATTATCTATCAAAAGGATGTAAGGGTTGTATATATAGATATTTGTATACCCAGGTACTGAATCTGAAAAAAAAAAACAAAAACTTTCAAAAGAGTTAAGACTTTGGGTGGCTATGTTTCACTGCTGAATAGGATTTAGAGAATGAAGCACAATTCTGCTGACTGCTTGGACCAACAGGTTTTACCCACTTCTCTTATGCGAGACAAAAATCATGCCTTCTAATATACTAATAGCAGCAGAGGTTTTACCATTCTGCAAATCAGGCTAGATGCGTGAGTGCAAAATTTTGGCACTTCAAAAATTCAGACGTTTTACTACATTTGTCAATGGCTCACCCTGCTTTTTATCTGCTGCACAGGAGCACTTTTTTCAGTTCCAGATTAAAAAAAATAAATAAATAAAAACTGACAGCATGGGCTCTTTGGTGGTGGTCCATTCAATGTCAGAAATTTTTGGTGTTCCCGACTATAGTGTGCGAATTATGGGTCCCAAAAAACGGTTTTAAAATCTCTACATTCCCTTTAAGAATCCTTCTTGAAGTTGTAGTTTATATATCTGAGCGTGCTCTTCCTAGCAGTGTTCAGTAGCAAAAGATGTTCAATACTGCAAGTTAGTAGTTTTATTCCAACAATGTTCTTCAGGTTTTCCCTTTGTGCTAGTTTTACAGTGCCAGCCAAAGATACATATAAAAAAAATTCCCTCCCTCAATCTCTAAGATTTTGAATTATGATGCTCAGTTGTCTATAGTGTGGTCCCTTTTTTTTTTTAATTGTACTTTCTGGATAAATGTATTCTTTCAACAAAATAAAGAAAAGTCAGAATTTCTGTTTACTTTTGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	Refseq >NM_001086290\|Xenopus laevis SMT3 suppressor of mif two 3 homolog 3 (sumo3), mRNA GAGGTCACGTGACCCTATTCTGCCTATCGAACCGCGTTATGTTGGGGGTGAAGCGCGTGCCCGCGAATAAGCGTTAGAGAGAAAAAATCTTCACAGACAGAAAAAGAGCGGGAGAGGTAGAAAAGGCAATCATGTCTGAAGAGAAACCCAAGGAAGGTGTGAAGACAGAGAATGACCACATCAACCTGAAAGTGGCAGGGCAGGATGGATCTGTGGTTCAGTTCAAAATAAAAAGGCACACACCACTCAGCAAGTTAATGAAAGCTTACTGCGACAGACAGGGCCTATCAATGCGACAGATAAGGTTCAGGTTTGATGGACAACCTATCAATGAAACAGACACACCTGCACAGCTGGAGATGGAAGATGAAGATACCATTGATGTGTTCCAACAACAGACAGGTGGTGTTTGCTAAACAGCCGAACAAGCTCAATCTCCAGTATGGCAGGAGCTCAAATTCCCTCCATATGCCTCATTTTTCACCTATATGCCCCTTGGATTTGCTGTTAAATAGTAACATGGAACAAACATGCTGATCACACGACACTTCTGAAAACGTTTGCGAACTTTCCCATGGATGAAATTCAATCAGAAATGCAGTTTTCTTTTCCAGCTGAACGTGCCAGACGTTGTATAGAGGGTCAATCTGAAGCATTGTCTTTCACTGCTGAAAGTTTTCAGGCTTTTTTTTTTGTGCAGTACTGTTTGTTTACAGCAGTTCTCTTTAGTTTCCCCCCCTCTGTTTCTTCAGATGTAAATAATTGGATCCTTGCTTGAGTAATTTTTGAGCCAGTTCCATGCCAGAGTGTGTTTTGCATATTCTGTGACATGCAAAAAGTTAATGCTTGCCCACACAGGCGACTGAAAGATGTCAAAAAAAAAATTGTTATACCAATAATCACAGATTGGAGGGAGGGGATGTGCTTTTATTTGCTAAACTATATGGTTCACTTGAAAATTATAAAAAGAATGCAAGGGTTGTGTATAAAGATGTGTGTACCCAGGTACTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001004853\|cysteine-rich, angiogenic inducer, 61 [Xenopus (Silurana) tropicalis] MSEEKPKEGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVC UniProtKB	Refseq >NP_001079759\|small ubiquitin-related modifier 3 precursor [Xenopus laevis] MSEEKPKEGVKTENDHINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGVC UniProtKB

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.47504 [+] Str.29836 Str.11611 Str.77773	Xl.7819 [+] Xl.84245
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	SUMO3
mouse		MGI	Sumo3	All(3) Targeted, knock Out(3)
zebrafish		ZFIN ZFIN	sumo3a sumo3b

Publications
First:		Enzymes of the SUMO modification pathway localize to filaments of the nuclear pore complex. [Mol Cell Biol 2002]
Most recent:
		View All Papers

Functional Ontologies
GO: Molecular:
Biological:		protein modification process
Cellular Component:
EC:
KOG:		[O] Ubiquitin-like proteins

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.5960.1.S3_at [+] Str.5960.1.S2_at Str.11611.1.A1_at Str.11611.1.A1_x_at	Xl.7819.1.S1_at
Affymetrix 2.0			Xl2.53787.1.A1_at [+] Xl2.7819.1.S1_at

Symbol legend[+]