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Summary Expression Gene Literature (2) GO Terms (32) Nucleotides (224) Proteins (53) Interactants (94) Wiki
XB-GENEPAGE-1004690
Gene Symbol:
pdlim1

Gene Name:
PDZ and LIM domain 1

Synonyms:
clim1 , clp36 , clp-36 , elfin , elfin-like ( Add synonyms , Nomenclature history )

Gene Function:
Adaptor protein Enigma and related PDZ-LIM proteins

Protein Function :
After binding acetylcholine, the AChR responds by an extensive change in conformation that affects all subunits and leads to opening of an ion-conducting channel across the plasma membrane.



Interactants:
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Diseases: 


External Links:
 
Xenbase Gene ID XB-GENE-1004691 XB-GENE-1004697 XB-GENE-17343112
Gene Symbol pdlim1 pdlim1.L pdlim1.S
Chromosome Chr7 chr7L Scaffold84
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 394527
398648
398461
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More..
Genomic
X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine pdlim1 pdlim1.L pdlim1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards PDLIM1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Pdlim1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Pdlim1 Ensembl
zebrafish
ZFIN, AGR pdlim1 ZFIN Ensembl
chicken
GEISHA PDLIM1 Ensembl
fruit fly
worm
Publications
First Transdifferentiation from cornea to lens in Xenopus laevis depends on BMP signalling and involves upregulation of Wnt signalling., BMC Dev Biol 2011                                                  
Most Recent Wnt-inducible Lrp6-APEX2 interacting proteins identify ESCRT machinery and Trk-fused gene as components of the Wnt signaling pathway., Sci Rep 2020              
All View All Papers
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 32 terms 4 terms 4 terms
PANTHER pdlim1
KEGG Pathways K23353 K23353 K23353
KOG [TZ] Adaptor protein Enigma and related PDZ-LIM proteins
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks pdlim1
ORFs pdlim1 ORF1 pdlim1.L ORF1 pdlim1.S ORF1 , pdlim1.S ORF2
Clones Horizon Source BioScience Horizon Source BioScience Horizon
Plasmids Addgene Addgene

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