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Summary Expression Gene Literature (3) GO Terms (10) Nucleotides (198) Proteins (43) Interactants (476) Wiki
XB-GENEPAGE-1007007
Gene Symbol:
lsm6

Gene Name:
LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated

Synonyms:
( Add synonyms , Nomenclature history )

Gene Function:
mRNA processing

Protein Function :


InterPro :
LSM dom euk/arc , Lsm6/sSmF , LSM dom sf , AS sf [+]

Interactants:
Loading ...

Diseases: 


External Links:
 
Xenbase Gene ID XB-GENE-1007008 XB-GENE-17337464 XB-GENE-1007013
Gene Symbol lsm6 lsm6.L lsm6.S
Chromosome Chr1 chr1L chr1S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 779701
108699439
447141
mRNA NCBI Nucleotide NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein NCBI Protein  More.. NCBI Protein RefSeq
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine lsm6 lsm6.L lsm6.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards LSM6 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Lsm6 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Lsm6 Ensembl
zebrafish
ZFIN, AGR lsm6 ZFIN Ensembl
chicken
GEISHA LSM6 Ensembl
fruit fly
worm
Publications
First Xenopus LSm proteins bind U8 snoRNA via an internal evolutionarily conserved octamer sequence., Mol Cell Biol 2002  
Most Recent An in vivo screen to identify candidate neurogenic genes in the developing Xenopus visual system., Dev Biol 2015                      
All View All Papers 1 paper(s) referencing morpholinos
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 10 terms 0 term 4 terms
PANTHER lsm6
KEGG Pathways K12625 K12625
KOG [A] Small nuclear ribonucleoprotein F
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks lsm6
Morpholinos (on-target & off-target) lsm6 MO1 lsm6 MO1
ORFs lsm6 ORF1 lsm6 ORF1 lsm6.S ORF1
Clones Horizon Source BioScience Horizon Horizon Source BioScience
Plasmids Addgene Addgene

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