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Summary Expression Gene Literature (12) Nucleotides (113) Proteins (21) Interactants (111) Wiki
XB-GENEPAGE-1009778

Gene Symbol: lig1

Gene Name: ligase I, DNA, ATP-dependent

Synonyms: ligI, ligase I, DNA ligase I
Add Xenopus synonyms , Nomenclature history


Gene Function: DNA replication and base excision repair

Interactants: cdk1(2) , cdk2(2) , plk1(2) , act3(1) , akt1(1) , anxa1(1) , ap3d1(1) View All

OMIM Disease Associations:
 
Xenbase Gene ID XB-GENE-1009779 XB-GENE-17337412 XB-GENE-1009783
Gene Symbol lig1 lig1.L lig1.S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 8.0 GBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 7.2 GBrowse 6.0
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide Refseq
Protein Refseq UniProtKB
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v8.0 gene model
GBrowse
laevis genome v7.2 gene model
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.54355 Xl.78 [+]
RNA-seq profile: Owens, Blitz et al. 2016 lig1
Images 6 expression image(s) for tropicalis and laevis
Data Mining
XenMine lig1 lig1.L lig1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards LIG1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Lig1 MGI, IMPC Ensembl, Eurexpress, MGI
zebrafish
ZFIN lig1 ZFIN Ensembl
chicken
GEISHA LIG1 Ensembl
fruit fly
worm
WORMBASE
Publications
First: DNA ligase I from Xenopus laevis eggs. [Nucleic Acids Res 1991]
Most recent: Prediction of Functionally Important Phospho-Regulatory Events in Xenopus laevis Oocytes. [PLoS Comput Biol 2015]
View All Papers
Functional Ontologies
GO: Molecular: ATP binding   DNA ligase (ATP) activity   PANTHER
      Biological: DNA recombination   DNA repair   DNA replication   PANTHER
      Cellular Component: PANTHER
EC: DNA ligase (ATP)
KOG: [L] ATP-dependent DNA ligase I
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
geneservice/RZPD imagenes geneservice/RZPD imagenes
Affymetrix 1.0 Str.20174.1.S1_a_at [+] Xl.78.1.S1_at [+]
Affymetrix 2.0 Xl2.78.1.S1_at [+]

Symbol legend[+]

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