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Summary Expression Gene Literature (1) GO Terms (19) Nucleotides (157) Proteins (29) Interactants (28) Wiki
XB-GENEPAGE-985582

Gene Symbol: smyd2

Gene Name: SET and MYND domain containing 2

Synonyms: ( Add Xenopus synonyms , Nomenclature history )

Gene Function: Predicted histone tail methylase containing SET domain

Protein Function :
Protein-lysine N-methyltransferase that methylates both histones and non-histone proteins, including p53/TP53 and RB1. Specifically methylates histone H3 'Lys-4' (H3K4me) and dimethylates histone H3 'L...[+]

Interactants: Loading ...
Disease Ontology:

OMIM Diseases:

 
Xenbase Gene ID XB-GENE-985583 XB-GENE-985586 XB-GENE-17330768
Gene Symbol smyd2 smyd2.L smyd2.S
Chromosome Chr05 chr5L chr5S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide Refseq Refseq
Protein NCBI Protein TrEMBL Refseq Swiss-Prot Swiss-Prot Refseq Swiss-Prot Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine smyd2 smyd2.L smyd2.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards SMYD2 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Smyd2 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ZFIN, AGR smyd2a smyd2b ZFIN Ensembl
chicken
GEISHA SMYD2 Ensembl
fruit fly
worm
WORMBASE
Publications
First smyd1 and smyd2 are expressed in muscle tissue in Xenopus laevis., Cytotechnology 2008  
Most Recent
All View All Papers 1 paper(s) referencing morpholinos 1 paper(s) referencing OMIMs 1 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 6 terms 13 terms 12 terms
PANTHER smyd2
KEGG Pathways K11426 K11426
KOG [B] Predicted histone tail methylase containing SET domain
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Morpholino smyd2 MO1 smyd2 MO1 smyd2 MO1
ORF smyd2.L ORF1 MGC82991 ORF1
Affymetrix 1.0 Str.15286.1.S1_at [+] Xl.16080.1.S1_at
Affymetrix 2.0 Xl2.16080.1.S1_at Xl2.29550.1.S1_at

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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