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Summary Expression Gene Literature (62) GO Terms (7) Nucleotides (160) Proteins (51) Interactants (1006) Wiki
XB-GENEPAGE-482730
Gene Symbol:
hoxd1

Gene Name:
homeobox D1

Synonyms:
xlab , mgc131028 , xhox.lab1 , Xhox.lab , xhoxd1 , Xlab-1 ( Add synonyms , Nomenclature history )

Gene Function:
homeodomain transcription factor

Protein Function :
Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis. Acts on the anterior bo...[+]


InterPro :
Homeobox dom , Homeobox metazoa , Homeobox CS , Homeobox-like sf

Interactants:
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Diseases: 


External Links:
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Xenbase Gene ID XB-GENE-482731 XB-GENE-17332403 XB-GENE-482735
Gene Symbol hoxd1 hoxd1.L hoxd1.S
Chromosome Chr9 chr9_10L chr9_10S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 549432
108701381
399267
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein RefSeq Swiss-Prot  More.. NCBI Protein TrEMBL RefSeq Swiss-Prot  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine hoxd1 hoxd1.L hoxd1.S
Phenotype X. tropicalis X. laevis.L X. laevis.S
Smith Morpholino Screen tneu039b14      
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards HOXD1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Hoxd1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Hoxd1 Ensembl
zebrafish
chicken
GEISHA HOXD1 Ensembl
fruit fly
worm
Publications
First Retinoic acid perturbs the expression of Xhox.lab genes and alters mesodermal determination in Xenopus laevis., Genes Dev 1991  
Most Recent Modeling Bainbridge-Ropers Syndrome in Xenopus laevis Embryos., Front Physiol 2020                      
All View All Papers 14 paper(s) referencing morpholinos 1 paper(s) referencing OMIMs 1 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 6 terms 5 terms 6 terms
PANTHER hoxd1
KEGG Pathways K09301 K09301 K09301
KOG [R] Transcription factor zerknullt and related HOX domain proteins
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks hoxd1
Morpholinos (on-target & off-target) hoxd1 MO1 , hoxd1 MO2 , hoxd1 MO3 hoxd1 MO1 , hoxd1 MO2 hoxd1 MO1 , hoxd1 MO2 , hoxd1 MO3
ORFs hoxd1.S ORF1
Clones Horizon Source BioScience Horizon Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info