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Summary Expression Gene Literature (9) GO Terms (21) Nucleotides (71) Proteins (36) Interactants (282) Wiki
XB-GENEPAGE-486060
Gene Symbol:
hoxa5

Gene Name:
homeobox A5

Synonyms:
hox1c , hox1.3 , hox-a5 ( Add synonyms , Nomenclature history )

Gene Function:
homeodomain transcription factor

Protein Function :


InterPro :
POU6F2 , Lambda DNA-bd dom sf , POU , POU dom [+]

Interactants:
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Diseases: 


External Links:
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Xenbase Gene ID XB-GENE-486061 XB-GENE-17335484 XB-GENE-6488471
Gene Symbol hoxa5 hoxa5.L hoxa5.S
Chromosome Chr6 chr6L chr6S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 496880
108718895
108719927
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein NCBI Protein
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine hoxa5 hoxa5.L hoxa5.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards HOXA5 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Hoxa5 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Hoxa5 Ensembl
zebrafish
ZFIN, AGR hoxa5a ZFIN Ensembl
chicken
GEISHA HOXA5 Ensembl
fruit fly
worm
Publications
First Knockdown of the complete Hox paralogous group 1 leads to dramatic hindbrain and neural crest defects., Development 2005                      
Most Recent Microsyntenic Clusters Reveal Conservation of lncRNAs in Chordates Despite Absence of Sequence Conservation., Biology (Basel) 2019              
All View All Papers 1 paper(s) referencing morpholinos
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 20 terms 6 terms 6 terms
PANTHER hoxa5
KEGG Pathways K09305 K09305 K09305
KOG [R] Transcription factor zerknullt and related HOX domain proteins
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks hoxa5
ORFs hoxa5 ORF1
Clones Horizon Source BioScience Horizon EXRC Horizon Source BioScience
Plasmids Addgene Addgene

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