Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (3) GO Terms (14) Nucleotides (2834) Proteins (56) Interactants (419) Wiki
XB-GENEPAGE-487048
Gene Symbol:
srsf5

Gene Name:
serine/arginine-rich splicing factor 5

Synonyms:
hrs , sfrs5 , srp40 ( Add synonyms , Nomenclature history )

Gene Function:
alternative splicing factor

Protein Function :


InterPro :
Nucleotide-bd a/b plait sf , RRM1 SRSF4-like , RBD domain sf , RRM dom [+]

Interactants:
Loading ...

Diseases: 


External Links:
1/4
 
Xenbase Gene ID XB-GENE-487049 XB-GENE-17340849 XB-GENE-865668
Gene Symbol srsf5 srsf5.L srsf5.S
Chromosome Chr8 chr8L chr8S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 448003
108699194
432350
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein TrEMBL NCBI Protein RefSeq  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine srsf5 srsf5.L srsf5.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards SRSF5 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Srsf5 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Srsf5 Ensembl
zebrafish
ZFIN, AGR ZFIN, AGR srsf5a srsf5b ZFIN Ensembl
chicken
GEISHA SRSF5A Ensembl
fruit fly
worm
Publications
First Alternative splicing of the fibronectin EIIIB exon depends on specific TGCATG repeats., Mol Cell Biol 1998  
Most Recent A functional screen for genes involved in Xenopus pronephros development., Mech Dev 2008                                                                                        
All View All Papers
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 12 terms 5 terms 3 terms
PANTHER srsf5
KEGG Pathways K12893 K12893 K12893
KOG [A] Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily)
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks srsf5
ORFs srsf5.S ORF1
Clones Horizon Source BioScience Horizon Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info