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Summary Expression Gene Literature (49) GO Terms (15) Nucleotides (192) Proteins (49) Interactants (1134) Wiki
XB-GENEPAGE-487351
Gene Symbol:
foxa1

Gene Name:
forkhead box A1

Synonyms:
xfkh2 , HNF3alpha , HNF-3 alpha , HNF3 alpha , HNF3-alpha , tFoxA1 , hnf3a , tcf3a , fkh2 , foxa1-a , foxa1-b , foxa1b ( Add synonyms , Nomenclature history )

Gene Function:
forkhead domain transcription factor

Protein Function :
Probable transcription factor.


InterPro :
EF hand dom , Spectrin/alpha-actinin , CH-domain , Actinin actin-bd CS [+]

Interactants:
Loading ...

Diseases: 


External Links:
1/6
 
Xenbase Gene ID XB-GENE-487352 XB-GENE-487356 XB-GENE-6256649
Gene Symbol foxa1 foxa1.L foxa1.S
Chromosome Chr8 chr8L chr8S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 395059
100125667
379755
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein RefSeq Swiss-Prot  More.. RefSeq Swiss-Prot  More.. RefSeq Swiss-Prot  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine foxa1 foxa1.L foxa1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards FOXA1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Foxa1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Foxa1 Ensembl
zebrafish
ZFIN, AGR foxa1 ZFIN Ensembl
chicken
GEISHA FOXA1 Ensembl
fruit fly
worm
Publications
First Liver specific transcription factors of the HNF3-, C/EBP- and LFB1-families interact with the A-activator binding site., Nucleic Acids Res 1991  
Most Recent Combinatorial transcription factor activities on open chromatin induce embryonic heterogeneity in vertebrates., EMBO J 2021                          
All View All Papers 6 paper(s) referencing morpholinos 3 paper(s) referencing OMIMs 7 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 13 terms 7 terms 7 terms
PANTHER foxa1
KEGG Pathways K09387 K09387 K09387
KOG [K] Forkhead/HNF-3-related transcription factor (alt_id KOG:3563)
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks foxa1
Morpholinos (on-target & off-target) foxa1 MO1 , foxa1 MO2 foxa1 MO1 , foxa1 MO2 foxa1 MO1 , foxa1 MO2
ORFs foxa1.L ORF1 foxa1.S ORF1
Clones EXRC Horizon Source BioScience Horizon Source BioScience Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info