Gene Symbol: setmar Gene Name: SET domain and mariner transposase fusion gene Add Xenopus synonyms Gene Function: histone methyl transferase Interactants:

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1
		Entrez Gene
mRNA		Refseq >NM_001114263|Xenopus (Silurana) tropicalis SET domain and mariner transposase fusion gene (setmar), mRNA CCATAAGCAGGGAAAGGTCCGATGGCGGCATGGCACAGACGGGACCCAGTGCTGCTGCTATGGCTCCGGAGGATGTGTGCTGCGGGACGGAGAGGCTTGCTGTGCCGGTGAGCGGCCCCTGGGAGAACCTGCCTGCCTTCCAGTACACCCCAGAGCTGATTGCCGGACCGGGAGCTGAACAAGATCCAAGCGAAGTGACCATCCAAGGCTGTGATTGCCGAGGCTCCAACTGTGTTGCTGAACTCTGCAGCTGCTTACCCCATGGTACCAACTATGTACGGCGCACCATTGTCAGCGGGCAAAGGCCAGTGCGGGAATGTCACATAATGTGCAGCTGTGGGGAATCCTGCCCCAACCGAGAGACCCAGCAGGGGCTTCAGTACCAGTTGCAGCTGTGCCAGAGGCCTGGGAAGGGCTGGGGGGTCTGTACGCTGGAAGATATCCCAAGCGGCAGGTTTGTGTGTGAATACGCTGGGGAGGTGCTTGGACATGAGCAGGCCCGAAGCAGAACACTCTCCCAGAACCCCTGTGCCAATAATTATATCATTGCAGTACGTGAGCATCTACATGGGGGGCAGATACTGCAGACCTTTGTAGACCCGACCCACATAGGCAACGTGGGCAGATTCTTAAACCACTCATGTGACCCAAACCTCTTCATGATGCCAGTCCGTACTCACTCCATGGTTCCAAAACTGGCACTGTTTGCTGCCCGGGATATCCAGGCCGGAGAGGAGCTGTGTTATGATTATTCAGGGAAATTCTTTAATCAGACTCCTGCCTGTGAAACTCTGGACCCGGAGGAACCGAGCTCACGCAAGAAGTGCCAGTGTGGGGCCAGGGCCTGCTCTGGTTTCCTTCCCTACGAAAGCTCTTTGTTTTAAATGTGACTCTGCCCCTCAGTTCTATAAGGCGCCTACTAAGATGGAGGGATTACCATGTGTTCAGCACTCCTACATGATATTCTCATAGGAATAAATTGCTTATTAACATGAAGTTTCCTCAAATGGGTACTCTACCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001107735|SET domain and mariner transposase fusion [Xenopus (Silurana) tropicalis] MAQTGPSAAAMAPEDVCCGTERLAVPVSGPWENLPAFQYTPELIAGPGAEQDPSEVTIQGCDCRGSNCVAELCSCLPHGTNYVRRTIVSGQRPVRECHIMCSCGESCPNRETQQGLQYQLQLCQRPGKGWGVCTLEDIPSGRFVCEYAGEVLGHEQARSRTLSQNPCANNYIIAVREHLHGGQILQTFVDPTHIGNVGRFLNHSCDPNLFMMPVRTHSMVPKLALFAARDIQAGEELCYDYSGKFFNQTPACETLDPEEPSSRKKCQCGARACSGFLPYESSLF

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI UCSC
Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.58231 [+] Str.11594
Unigene EST Profile		EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	SETMAR
mouse		MGI	Setmar	All(1) Targeted, other(1)
zebrafish			setmar

Publications
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Functional Ontologies
GO: Molecular:		cysteine-type endopeptidase activity histone-lysine N-methyltransferase activity zinc ion binding
Biological:		chromatin modification proteolysis
Cellular Component:		nucleus
EC:
KOG:		[BK] Histone H3 (Lys9) methyltransferase SUV39H1/Clr4, required for transcriptional silencing

Reagents		tropicalis	laevis
Clones		open biosystems
		geneservice/RZPD imagenes
Affymetrix 1.0		Str.41239.1.S1_at [+] Str.11594.1.A1_at
Affymetrix 2.0

Symbol legend[+]

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