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Summary Expression Gene Literature (1) GO Terms (10) Nucleotides (113) Proteins (25) Interactants (441) Wiki
XB-GENEPAGE-5941005
Gene Symbol:
lsm5

Gene Name:
LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated

Synonyms:
MGC85219 ( Add synonyms , Nomenclature history )

Gene Function:
mRNA processing

Protein Function :
Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.


InterPro :
LSM dom euk/arc , LSM dom sf , LSm5

Interactants:
Loading ...

Diseases: 


External Links:
 
Xenbase Gene ID XB-GENE-5941006 XB-GENE-5941032 XB-GENE-17334649
Gene Symbol lsm5 lsm5.L lsm5.S
Chromosome Chr6 chr6L
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1
CDS Gene model Gene model
Entrez Gene 100216118
447076
mRNA NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine lsm5 lsm5.L lsm5.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards LSM5 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Lsm5 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Lsm5 Ensembl
zebrafish
ZFIN, AGR lsm5 ZFIN Ensembl
chicken
GEISHA LSM5 Ensembl
fruit fly
worm
Publications
First Left-right patterning in Xenopus conjoined twin embryos requires serotonin signaling and gap junctions., Int J Dev Biol 2014                  
Most Recent
All View All Papers
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 10 terms 5 terms 0 term
PANTHER lsm5
KEGG Pathways K12624 K12624
KOG [A] U6 snRNA-associated Sm-like protein
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks lsm5
ORFs lsm5.L ORF1
Clones Horizon Source BioScience Horizon Source BioScience
Plasmids Addgene Addgene

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