Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (1) GO Terms (8) Nucleotides (64) Proteins (38) Interactants (57) Wiki
XB-GENEPAGE-854776
Gene Symbol:
prdm5

Gene Name:
PR domain 5

Synonyms:
( Add synonyms , Nomenclature history )

Gene Function:
zinc finger, C2H2 type

Protein Function :


InterPro :
Znf C2H2 sf , SET dom , Znf PRDM5-like , Znf C2H2 type [+]

Interactants:
Loading ...

Diseases: 


Disease Ontology:
brittle cornea syndrome

OMIM:
BRITTLE CORNEA SYNDROME 2; BCS2

External Links:
 
Xenbase Gene ID XB-GENE-854777 XB-GENE-6487837 XB-GENE-17345253
Gene Symbol prdm5 prdm5.L prdm5.S
Chromosome Chr1 chr1L
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1
CDS Gene model Gene model
Entrez Gene 100487368
108710571
mRNA NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein NCBI Protein  More.. NCBI Protein NCBI Protein  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine prdm5 prdm5.L prdm5.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards PRDM5 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Prdm5 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Prdm5 Ensembl
zebrafish
ZFIN, AGR prdm5 ZFIN Ensembl
chicken
GEISHA PRDM5 Ensembl
fruit fly
worm
Publications
First Spatiotemporal expression of Prdm genes during Xenopus development., Cytotechnology 2015    
Most Recent
All View All Papers
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 8 terms 0 term 0 term
PANTHER prdm5
KEGG Pathways
KOG [R] FOG: Zn-finger
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks prdm5
Clones Horizon Horizon
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info