rnf7 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

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Nucleotides (195)

Interactants (0)

XB-GENEPAGE-942276

Gene Symbol: rnf7 Gene Name: ring finger protein 7 Add Xenopus synonyms Gene Function: mediator of ubiquitin ligase activity Interactants:

XB-GENE-942277

XB-GENE-942280

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001114261\|Xenopus (Silurana) tropicalis ring finger protein 7 (rnf7), mRNA GCGAGCGGACCCAAGATGTTCTCCTTGAAGAAATGGAACGCGGTGGCGATGTGGAGCTGGGATGTGGAGTGCGATACGTGCGCTATCTGCAGGGTGCAGGTCATGGATGCCTGCCTGCGCTGCCAAGCTGAGAACAAACAGGAGGACTGTGTGGTGGTGTGGGGAGAATGTAACCACTCCTTTCATAATTGCTGCATGTCCCTATGGGTAAAGCAGAATAACCGCTGCCCATTATGCCAACAAGACTGGGTGGTGCAGAGAATAGGCAAATAGCCAGCGTGGGACAGTCCATACACCATCCGTACCATCAGGAGAGGCATGTCTGATTTTGTGCCTGCCCGTGATTCAGGCAGTTAGTGTGCAGTGGTTCCTACTGGTGTGCATTGATTTTCTGCAGATCCCAGGGCTGGTCATGTCCACCAGCGACTGCTAATGTTCTGCTGCCTCTGACACTCTCAGTCCAGGAGAAAAAGGAATAAAGACGCTATTTTTCCTTTGTACCTTGGACCCGAGAAATAATATTGTGTGCTTTGTGTTTGTTTAAATGTGCAATAAACCAAATTCTCATTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAA	Refseq >NM_001091075\|Xenopus laevis ring finger protein 7 (rnf7), mRNA GATCCGTTCCCGCAGCCCATCGACAGGATTGGTTATATGAAGAGCCGTCTCCTGCCGGTATGGCCGCTTTGCGTGAGGAGCACGGAGCTAAAATGTTCTCCTTGAAGAAATGGAACGCGGTGGCGATGTGGAGCTGGGATGTGGAGTGCGATACGTGCGCTATCTGCCGGGTGCAGGTTATGGATGCCTGTCTGCGCTGCCAAGCTGAGAACAAACAGGAGGACTGTGTGGTGGTGTGGGGAGAATGTAACCACTCCTTTCATAATTGCTGCATGTCCCTATGGGTGAAGCAGAACAACCGCTGCCCCTTATGCCAACAAGACTGGGTGGTGCAGAGAATCGGCAAATAGCCAGCGTGGGACAGTCCAAACGCCATCCTTGTGCTGCAGCATGACTCCTTTCTATTTTGAACACAAGAAATAATATTGTGTGTATTGTGTTCCTGTTTAATGTGCAATAAACCAAATTATCGTTCTAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001107733\|ring finger protein 7 [Xenopus (Silurana) tropicalis] MFSLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIGK	Refseq >NP_001084544\|ring finger protein 7 [Xenopus laevis] MAALREEHGAKMFSLKKWNAVAMWSWDVECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQRIGK

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.1308 [+] Str.59702 Str.60723	Xl.21083
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	RNF7
mouse		MGI	Rnf7	All(4) Targeted, other(2) Gene Trapped(1)
zebrafish		ZFIN	rnf7

Publications
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Most recent:
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Functional Ontologies
GO: Molecular:		ubiquitin-protein ligase activity zinc ion binding
Biological:		protein ubiquitination
Cellular Component:		ubiquitin ligase complex
EC:		ubiquitinprotein ligase
KOG:		[O] SCF ubiquitin ligase, Rbx1 component

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.36627.1.A1_at [+] Str.1308.1.S1_at Str.43840.1.A1_at	Xl.21083.1.S1_at
Affymetrix 2.0			Xl2.21083.1.S1_at

Symbol legend[+]