Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (1) GO Terms (8) Nucleotides (156) Proteins (44) Interactants (216) Wiki
XB-GENEPAGE-944145
Gene Symbol:
ggps1

Gene Name:
geranylgeranyl diphosphate synthase 1

Synonyms:
( Add synonyms , Nomenclature history )

Gene Function:
Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase

Protein Function :


InterPro :
Rhs assc core , EGF-like dom , CarboxyPept-like regulatory , Tox-GHH dom [+]

Interactants:
Loading ...

Diseases: 


External Links:
 
Xenbase Gene ID XB-GENE-944146 XB-GENE-944152 XB-GENE-17338000
Gene Symbol ggps1 ggps1.L ggps1.S
Chromosome Chr5 chr5L chr5S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 549876
100049104
108717904
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More.. NCBI Protein NCBI Protein  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine ggps1 ggps1.L ggps1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards GGPS1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Ggps1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Ggps1 Ensembl
zebrafish
ZFIN, AGR ggps1 ZFIN Ensembl
chicken
GEISHA GGPS1 Ensembl
fruit fly
worm
Publications
First High variability of expression profiles of homeologous genes for Wnt, Hh, Notch, and Hippo signaling pathways in Xenopus laevis., Dev Biol 2017                    
Most Recent
All View All Papers
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 8 terms 2 terms 2 terms
PANTHER ggps1
KEGG Pathways K00804 K00804 K00804
KOG [H] Geranylgeranyl pyrophosphate synthase/Polyprenyl synthetase (alt_id KOG:0777)
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks ggps1
ORFs ggps1 ORF1 ggps1.L ORF1
Clones Horizon Source BioScience Horizon Source BioScience Horizon
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info