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Summary Expression Gene Literature (5) GO Terms (23) Nucleotides (220) Proteins (38) Interactants (402) Wiki
XB-GENEPAGE-960315
Gene Symbol:
kdm6a

Gene Name:
lysine demethylase 6A

Synonyms:
utx , tutx , xtutx ( Add synonyms , Nomenclature history )

Gene Function:
DNA-binding protein jumonji/RBP2/SMCY, contains JmjC domain

Protein Function :


InterPro :
TPR-like helical dom sf , JmjC dom , TPR-contain dom , TPR repeat [+]

Interactants:
Loading ...

Diseases: 


Disease Ontology:
Kabuki syndrome

OMIM:
KABUKI SYNDROME 1; KABUK1 [+]

External Links:
1/6
 
Xenbase Gene ID XB-GENE-960316 XB-GENE-17342352 XB-GENE-960319
Gene Symbol kdm6a kdm6a.L kdm6a.S
Chromosome Chr2 chr2L chr2S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model
Entrez Gene 100170558
446609
mRNA NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine kdm6a kdm6a.L kdm6a.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards KDM6A OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Kdm6a MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Kdm6a Ensembl
zebrafish
ZFIN, AGR kdm6a ZFIN Ensembl
chicken
GEISHA KDM6A Ensembl
fruit fly
worm
Publications
First Comparative expression analysis of the H3K27 demethylases, JMJD3 and UTX, with the H3K27 methylase, EZH2, in Xenopus., Int J Dev Biol 2012                                            
Most Recent Using Xenopus to analyze neurocristopathies like Kabuki syndrome., Genesis 2021        
All View All Papers 2 paper(s) referencing OMIMs 2 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 23 terms 0 term 3 terms
PANTHER kdm6a
KEGG Pathways K17854 [+] K11447
KOG [R] DNA-binding protein jumonji/RBP2/SMCY, contains JmjC domain
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks kdm6a
ORFs kdm6a.S ORF1
Clones Horizon Source BioScience Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info