hoxc4 Summary [species: Xenopus laevis and Xenopus tropicalis]

Summary

Expression

Gene Literature (3)

XB-GENEPAGE-967140

Gene Symbol:

hoxc4

Gene Name:

homeobox C4

Synonyms:

( Add synonyms , Nomenclature history )

Gene Function:

homeodomain transcription factor

Protein Function Downloaded from UniProtKB

InterPro

HERPUD1/2 , Homeobox Antennapedia CS , Homeobox metazoa , Homeobox antennapedia [+]

Interactants:

Loading ...

Diseases:

External Links:

ClinVar, ClinGen, MalaCards, KEGG Disease, DECIPHER, COSMIC, MARRVEL, GTR, DisGeNET, dbVAR, GHR, gnomAD

Xenbase Gene ID

XB-GENE-967141

XB-GENE-6485721

XB-GENE-17344104

Gene Symbol

hoxc4

hoxc4.L

hoxc4.S

Chromosome

Chr2

Molecules

X. tropicalis

X. laevis.L

X. laevis.S

Genomic Sequence

Version 10.0

>hoxc4 10.0 
							GTAAGCCTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTATGTGTGTGTATGTGTGTGTGTATGGGGGGGCACTCTCCACCCACCTCTGGGATCCATGTAATGGGCAAAGCCAGTCCTACCTGCTCATGCCAACCCAATGCTCAATGTCCCAACCCTATGGGCATGCACAAGTGCACAGAGCCCAATGTCAGCCTATGGACTCCACCAGGGCAACAGAACAACAAACAAGGGAAGGAGAAAATCATTTGGAATGAGCCTCTGGTTCCTTATCCGGGGACCTGAGCGCACGTTGTGATTGGCTGGAGGAGTCACATGGTGAAAGTAACTTTACGGGGTCGCCAGCTAGTAGGAGGGCTTTATGGAGCAGAAAAACGACAAAGCGAGAAAAATTATTTTCCACTCCAGAAATTAATGATCATGAGTTCGTATTTGATGGACTCTAACTACATCGATCCGAAATTTCCTCCATGCGAGGAATATTCGCAAAATAACTATATCCCAGAGCACAGTCCGGAGTACTACAGCCGCTCCAGGGACCCTGCCTTTCAGCACCACCAGGACCTGTACCCGCCAAGAACTGCTTACCCAGAGCGCCAGTTCAGCTGTGCCAGTATCCAGGCGCCGGGCAACCCAGCAACCCACCCCAGGCTCCATGGGCAGCCCCAGAGCAACCACAACCTTGTAGGCAAATCTCAGCTGTGTGAGCATCCAACCCCATCCCTTGCCTCCAACAGCAGCTCCAGCTCTCCCTCTCCTGCACCCACAGCCTGCACCCAGGCACCCACCTCTGAGCACCCCACCAACACTGCCTCTAAACAGCCCATAGTCTACCCCTGGATGAAGAAAATACACGTCAGTTCTGGTAGGAAACTTTGGCTTCCCTCTAACCCCTCTCTCTCTCTCTCTCCCTCTTTAAAGCTTAAGTCTTTGGGTTAGCACAATTGAACTGGATTTACGACTCCGAATGGGTAATTACACCCACCATAAATTTTATAGCCAAGCCTGTCTGGGTTGCTTCAGCCATGTGGCTCATTCAGATCTCTATGTGGTGTGTGTGTGTGTGAGAGAGTCAGGGAGAAGCTTTGGAAGGGGAACATAAATAATTCAGCCTCTTTGGAGCTTAGGGAACCCCCTTCTTAATAGAGTACAGAAACCTGGATCGTTAGTGGATTTCAAAGGCTTTTTATGTGGTCTCTTCCCTCTTGTGTGATCCCTTCCTCCCTGTGCCTGTGCTTATCCTATGTGCCTATGCCCATTCCCTCTCTTTATTTTCCCTTCATCCCCGTCTGATCTTCTCCTTTCTTTCTCAGTGAATCCTAATTACACTGGGGGTGAGCCCAAGAGGTCCAGAACAGCCTATACCAGGCAGCAGGTCTTGGAACTGGAGAAGGAATTTCACTATAACAGATATCTGACCAGGCGAAGGCGCATTGAGATTGCCCATTCCCTGTGTCTGTCCGAGAGGCAGATCAAGATCTGGTTTCAGAACAGGAGGATGAAGTGGAAAAAGGACCACAGGTTACCAAATACTAAAGTCAGATCCAACGCTTCTTCCAATGCTTCCAGCAACATCATTGCTTCTAGTGCTGCTGCCAGCGAGGATCTATCGCAAAGCTCCACTCAGGATCAGCGAGAGGATATTACAAGGTTATAAAACACATGGCAACACACACAACAAAACAGATGACTGAATATTTATAGAATCTAATATATATATATATATTTTGGTTCTTCTAGATGTATTCCTTTTTATGTTCGTTGCTTGTGCGTTGGAAAAAAAAACATGAAGTCTCTCGGTCATCATATAAAGGCTTTAAATGCATGCCAGCCAGCATGGAGCCAGGTTTTCTGTACAGTGTTTCTCTTTTCTTCTATTGATTTTTATAAAGCCAGTTTGTCTTTATTTATTGTGCATTTTTTGGGGAGGGGTGGGGGGAAAATGTTCAGTTTCATGTGAATTTTTTTTTTCTTAAGATTAAAAGAAAAACAGGGTTGTGAATTTGCCCTTTAAATATTTAAAATAAGTCTGTAGTAGATGAAAAATATCGAAGTGGGACGAATTTTTTTTTGTATAAAACGATAAGGATGATATTACTATGTGCAGATCTTCTCAAAGGCACAGATAGCAGCACACGAGCTAGAAAGTGGCGTGCATTAAATCAAATAATAACAATATTGTGAAGATATTGAAAGAAAGTTTCCAAGTCGGCTAGTTAGCTCGTTGTTTTGTGAAAAGTGTCCTACAATTTCCCTTTTTTTATTATTTTATTTTTTTAGTTGAGACTCTGATGTAATCCTAATTGCTATAAACAGTCCCAGTGTTATGTGCCCGTCTCTGTGTTCAATAAACCAGTGAGTGTGCTTGAGTTCTACCTGCCAGTCTATTTGCTTATTTTGCTGTACATGTGAGCCACGGTTGGAGAGATAGGTAGATTCCAGGGGTTTATATTCCCCTTGCAATATTACAATCCCAGGAGATGGGGGAATATACATCCCCTAGCACTGCACACTTCGTGCTGCTTTGTGCTTTTACAGATGTAACCTTGAAATGACTGAGCGAATTGTTGTTTACATTTATTTATTTTTTTATATATATATTTATTTTGTTATTGGCCTATCTGTGTTTTATTACTGTGTAGCTAGGATTACTCTGTGCTGTGTGAGCATGATATTCCCACTTTCTATTAGATAATACATTGGATTTCATTCCGAGTAGAGTTTAATAAAAATTGGAAAAAAAAACCTCAA

CDS

Gene model

Entrez Gene

100486039

mRNA

NCBI Nucleotide

>XM_002936638|PREDICTED: Xenopus tropicalis homeobox C4 (hoxc4), mRNA
								GTAAGCCTGTGTGTGTGTGTGTGTGTGTGTGTATGTGTGTGTGTGTATGTGTGTGTATGTGTGTGTGTATGGGGGGGCACTCTCCACCCACCTCTGGGATCCATGTAATGGGCAAAGCCAGTCCTACCTGCTCATGCCAACCCAATGCTCAATGTCCCAACCCTATGGGCATGCACAAGTGCACAGAGCCCAATGTCAGCCTATGGACTCCACCAGGGCAACAGAACAACAAACAAGGGAAGGAGAAAATCATTTGGAATGAGCCTCTGGTTCCTTATCCGGGGACCTGAGCGCACGTTGTGATTGGCTGGAGGAGTCACATGGTGAAAGTAACTTTACGGGGTCGCCAGCTAGTAGGAGGGCTTTATGGAGCAGAAAAACGACAAAGCGAGAAAAATTATTTTCCACTCCAGAAATTAATGATCATGAGTTCGTATTTGATGGACTCTAACTACATCGATCCGAAATTTCCTCCATGCGAGGAATATTCGCAAAATAACTATATCCCAGAGCACAGTCCGGAGTACTACAGCCGCTCCAGGGACCCTGCCTTTCAGCACCACCAGGACCTGTACCCGCCAAGAACTGCTTACCCAGAGCGCCAGTTCAGCTGTGCCAGTATCCAGGCGCCGGGCAACCCAGCAACCCACCCCAGGCTCCATGGGCAGCCCCAGAGCAACCACAACCTTGTAGGCAAATCTCAGCTGTGTGAGCATCCAACCCCATCCCTTGCCTCCAACAGCAGCTCCAGCTCTCCCTCTCCTGCACCCACAGCCTGCACCCAGGCACCCACCTCTGAGCACCCCACCAACACTGCCTCTAAACAGCCCATAGTCTACCCCTGGATGAAGAAAATACACGTCAGTTCTGTGAATCCTAATTACACTGGGGGTGAGCCCAAGAGGTCCAGAACAGCCTATACCAGGCAGCAGGTCTTGGAACTGGAGAAGGAATTTCACTATAACAGATATCTGACCAGGCGAAGGCGCATTGAGATTGCCCATTCCCTGTGTCTGTCCGAGAGGCAGATCAAGATCTGGTTTCAGAACAGGAGGATGAAGTGGAAAAAGGACCACAGGTTACCAAATACTAAAGTCAGATCCAACGCTTCTTCCAATGCTTCCAGCAACATCATTGCTTCTAGTGCTGCTGCCAGCGAGGATCTATCGCAAAGCTCCACTCAGGATCAGCGAGAGGATATTACAAGGTTATAAAACACATGGCAACACACACAACAAAACAGATGACTGAATATTTATAGAATCTAATATATATATATATATTTTGGTTCTTCTAGATGTATTCCTTTTTATGTTCGTTGCTTGTGCGTTGGAAAAAAAAACATGAAGTCTCTCGGTCATCATATAAAGGCTTTAAATGCATGCCAGCCAGCATGGAGCCAGGTTTTCTGTACAGTGTTTCTCTTTTCTTCTATTGATTTTTATAAAGCCAGTTTGTCTTTATTTATTGTGCATTTTTTGGGGAGGGGTGGGGGGAAAATGTTCAGTTTCATGTGAATTTTTTTTTTCTTAAGATTAAAAGAAAAACAGGGTTGTGAATTTGCCCTTTAAATATTTAAAATAAGTCTGTAGTAGATGAAAAATATCGAAGTGGGACGAATTTTTTTTTGTATAAAACGATAAGGATGATATTACTATGTGCAGATCTTCTCAAAGGCACAGATAGCAGCACACGAGCTAGAAAGTGGCGTGCATTAAATCAAATAATAACAATATTGTGAAGATATTGAAAGAAAGTTTCCAAGTCGGCTAGTTAGCTCGTTGTTTTGTGAAAAGTGTCCTACAATTTCCCTTTTTTTATTATTTTATTTTTTTAGTTGAGACTCTGATGTAATCCTAATTGCTATAAACAGTCCCAGTGTTATGTGCCCGTCTCTGTGTTCAATAAACCAGTGAGTGTGCTTGAGTTCTACCTGCCAGTCTATTTGCTTATTTTGCTGTACATGTGAGCCACGGTTGGAGAGATAGGTAGATTCCAGGGGTTTATATTCCCCTTGCAATATTACAATCCCAGGAGATGGGGGAATATACATCCCCTAGCACTGCACACTTCGTGCTGCTTTGTGCTTTTACAGATGTAACCTTGAAATGACTGAGCGAATTGTTGTTTACATTTATTTATTTTTTTATATATATATTTATTTTGTTATTGGCCTATCTGTGTTTTATTACTGTGTAGCTAGGATTACTCTGTGCTGTGTGAGCATGATATTCCCACTTTCTATTAGATAATACATTGGATTTCATTCCGAGTAGAGTTTAATAAAAATTGGAAAAAAAAACCTCAA

Protein

NCBI Protein

TrEMBL

More..

Genomic

X. tropicalis

X. laevis.L

X. laevis.S

Genome Browser

(Click image to open in Genome Browser)

Genomic Synteny

Genomicus PANTHER

Expression

Development Stages

Embryonic Tissues

Adult Tissues

Summary for

More Information

Xenbase Expression Details

In situ images

Single cell data at SPRING

Ensembl

Data Mining

X. tropicalis

X. laevis.L

X. laevis.S

XenMine

hoxc4

hoxc4.L

hoxc4.S

Orthology

Knowledgebases

Entrez Gene

Genetic Phenotypes

Gene Expression

human

HGNC AGR, OMIM:Gene, GeneCards

HOXC4

OMIM

Ensembl, Allen Brain Atlas, Protein Atlas

mouse

MGI, AGR

Hoxc4

MGI, IMPC

Ensembl, Allen Brain Atlas, Eurexpress, MGI

rat

RGD, AGR

Hoxc4

Ensembl

zebrafish

ZFIN, AGR

hoxc4a

ZFIN

Ensembl

chicken

GEISHA

HOXC4

Ensembl

fruit fly

worm

Publications

First

The binding of Ku antigen to homeodomain proteins promotes their phosphorylation by DNA-dependent protein kinase., J Biol Chem 2001

Most Recent

A molecular atlas of the developing ectoderm defines neural, neural crest, placode, and nonneural progenitor identity in vertebrates., PLoS Biol 2017

All

View All Papers 1 paper(s) referencing Disease Ontology

Functional Ontologies

X. tropicalis

X. laevis.L

X. laevis.S

11 terms

0 term

PANTHER

hoxc4

KEGG Pathways

KOG

[R] Transcription factor zerknullt and related HOX domain proteins

Reagents

X. tropicalis

X. laevis.L

X. laevis.S

CRISPRscan Tracks

hoxc4

Clones

Horizon

Source BioScience

Plasmids

Addgene

Symbol legend:

Blast sequence

View sequence

Literature or expression images

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