Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (1) GO Terms (9) Nucleotides (172) Proteins (25) Interactants (3) Wiki
XB-GENEPAGE-983867
Gene Symbol:
brdt

Gene Name:
bromodomain, testis-specific

Synonyms:
ct9 , brd6 ( Add synonyms , Nomenclature history )

Gene Function:
Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins

Protein Function :
Testis-specific chromatin protein that specifically binds histone H4 acetylated at 'Lys-5' and 'Lys-8' (H4K5ac and H4K8ac, respectively) and plays a key role in spermatogenesis. Required in late pachyt...[+]



Interactants:
Loading ...

Diseases: 


OMIM:
SPERMATOGENIC FAILURE 21; SPGF21

External Links:
 
Xenbase Gene ID XB-GENE-983868 XB-GENE-17346476 XB-GENE-983871
Gene Symbol brdt brdt.L brdt.S
Chromosome Chr04 chr4L chr4S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model
Entrez Gene 100144959
108713543
398944
mRNA NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein NCBI Protein
Genomic
tropicalis laevis.L laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining tropicalis laevis.L laevis.S
XenMine brdt brdt.L brdt.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards BRDT OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Brdt MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Brdt Ensembl
zebrafish
ZFIN, AGR brdt ZFIN Ensembl
chicken
GEISHA BRDT Ensembl
fruit fly
worm
Publications
First Identification of an outer segment targeting signal in the COOH terminus of rhodopsin using transgenic Xenopus laevis., J Cell Biol 2000                  
Most Recent
All View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 9 terms 0 term 0 term
PANTHER brdt
KEGG Pathways
KOG [K] Transcription initiation factor TFIID, subunit BDF1 and related bromodomain proteins
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks brdt
Clones Horizon Source BioScience Horizon Horizon Source BioScience

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
Xenbase: The Xenopus Model Organism Knowledgebase.
Version: 4.14.0
Major funding for Xenbase is provided by grant P41 HD064556