dmrta2 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (0)

Nucleotides (51)

Interactants (0)

XB-GENEPAGE-997962

Gene Symbol: dmrta2 Gene Name: DMRT-like family A2 Add Xenopus synonyms Gene Function: transcription factor Interactants:

XB-GENE-997963

XB-GENE-997967

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001103073\|Xenopus (Silurana) tropicalis DMRT-like family A2 (dmrta2), mRNA GACCTGCTGCCTGGCATCGGATCTCTCACCTCTCCGGGGAAGTCGCTGGTCTGACAGCCCAACCGGCAGCCTCTACACCTGGGTGCAGTTTATCAGTTTATGTGGGAGAGGTGTGTGCCTGTGGGGGAGACCAGGCTGTGGGTCGGGGGTGAGTGGCCTGAGGGGAGTCGGGGCTAGAGAGTAAGCTGTGTGGGTGAAAGGTACTGAGGGCAAGTTCTGCGCTAATCTATTCTGTCGGATTGGGATACAAATCTATTGGCCCTAATGAGATAATCTGTTGGTACCTGACTGAATGGAAAGGGCACAGGTTTAGGCGGGCACAAGGGCAGTCTATGGGATTGTGTAGAAAAAAACCCAAACAGCTCACCTTACATTTCTTTAGAACTTAATTTACTGCTGTTTCTTGGGGATTTAAGTTTAGTGCCAGTCTGTGTATAGTGCAGACCAGTAAGGCTGGAGCTTTTGCCTTTTGCCATCCCCTGTGTCACTGGGTGAGTGGGTGAGTGGGTAAGGCTGGGGCACCGGGTTATATAGAGGGGCCAGTACACCTGTCATTCATTATAAAGATTATAGGGGGATAGAGTGTAGTAAATCAATTCTAGAATGGAACTGAATGGACCCCCAGTTTCCCAGCTTCCTCAGACCGCAACTTCTACCGCATCACTTCCAGTCACAGTGGCCGGTACTCTCCTACGTGGCCCCCAGCTGCTGCTCCGAGCCGCAGAGAAGTATCCCCGTACCCCCAAGTGCGCCCGCTGCAGGAATCACGGGGTAGTGTCTGCGCTCAAGGGCCACAAGCGCTACTGCCGCTGGAAAGACTGTATGTGCGCAAAGTGTACGCTGATCGCGGAGCGCCAGAGGGTTATGGCCGCGCAAGTTGCGCTACGCAGGCAGCAAGCCCAGGAGGAGAATGAGGCCCGAGAGCTGCAGCTTCTCTATGGAACTGCTGAAGGATTGGCACTGGCGGCAGCCAATGGCATCATCCCACCCCGGCCAGCCTACGAGGTCTTCGGATCGGTGTGTACAGAGGGAGGAACAGATTCAAAGATTCAGAAGTTCGACTTGTTCCCTAAAAGCCTCATCCCCAGATCTGTGACTCCTCAACTGTCTTCTGGGGGAAAACCAGTGTCCCCAGACAGTGAATCGGTGTCAGGCAGTGCACCAGGTGCCTCATCCCCTGAAGCACGGCCTGGTTCTGGCTCGGAAAATGGGGATGGGGAGTCCTTGCTCAGTTCCCCCATCTCTAAGGCACTCAAAGAAGGAGAGGAGAGCCCAAGCTCAATTAGCCCCCTGGGCTCAGAATCTGGATCTGATGCTGAAAAAGATGAGCAGGATCCCAGTTCTTCCTCCTCAGCCAGGCAGAGGACCCCCATAGACATCCTGACCAGGGTCTTCCCTGCTCAGAAGAGGAGCGTTCTGGAACTGGTGCTGCAGGGCTGTGGGGGAGATGTGGTTCAAGCAATTGAACAGATACTAAACAACAGGGGACAGGATAAGAGTGAAGAGACCTGGTCAAGAGATGGAGCCCTCCCAAGTATTCAGCCATCAGTGTCCTCCACACACAGACCCCTTATTGCTGGAGCCCTTACTCCTGCTATTGGCACATTAGGGAGCAGGTCTGCATTCTCCCCTTTACAACCCAATGGCGCACACTTTGGCACTGAGGCTAATGCATACCAGCTTGGTGGGCACCTTGGGTTAAACCCACTGAGGTTAGCCTATTCTGCGCACAGTAGAGGACTTGCTTTCATGGCCCCTTACTCAACAGCTGGTTTCATGCCTACCCTTGGCTTTCGCCCACCCATGGACTACGCCTTCAGTGACCTTATGAGGGACAGGGCCAATGTTCACAAGGACCAGGTATACACTAATGGACTCTATGGGCCAGTGGTCAATAATAATGCTGAAAAACAATGAATTCTTTATATAAGGACCTGAAAAACCTGTGGCTTGCAGGCTCAGATTCTGATTTTAGGGTATTTCCATGGGTTTGGATAACAAATGTCATAAAGTCTTAAGAACATCTCAAGTAATCAAGAAGTCTGAAGCCCAGTCTGGAGAATGAACTAGTTAGGTAGAGCACTGTAAAGACATTCCTATTCTCTGCAAGGCAACGTGATGCTTTCTGGATTTTTGGAGGACATGGAAATTCCTAAATCATTATAAAATACAAACTGCACTTTTTCTGTTAATAAAAGGGGTGACGTTATTTCTGCTTAAGGATATAAGCACGGACACAAGTCCCAATCCATTGTGATATTATAAATATATACATATATAAATATATAGACTTCTAATGTTATGAGCTGGGATTCTAAGTTATTCTTGTACATTGGCATTGAACCCTTTCTCATGATAACAAGGAGCCCTGTTATGGCACGCTACAAGTGCAACAGGGTGCAGCAGCATAGACTGCTCTGTGTGTACAGATGTGGGTAGGAATGGGGGGGGGCAGCATTCAGATCCCCCTTTATTTGGTGAATTTCAAACCATTGCTGTTGGTTTAATTGTTTAGAAAATTGTTAACACCTTTATGTGACCGTTCCCTAAGCATTAGAAATAAATGTTATTTTCTAAAAAAAAAAAAAAAAA	Refseq >NM_001095679\|Xenopus laevis DMRT-like family A2 (dmrta2), mRNA TGAGTGTAACGTGTTGGAGCCGGACTGTCCTGTGTCTCCTTTCACTGTCACAGCGGCCGGACCTGCAGCCTGAGATCTGTCACGTGTGCAGGGGAGTCGGGCCTCTCAGAGAGTGCGGGGAGTGCAGGGGAGCAGCTTCTGGGTAGGAGCGTGCTAGAGAAGACCTCAGGTGTGGGCGAATCGTGGGTTGGAGGGTGCTCACTGCTCAGTGATGTGAGTTCTGGATCTAACCTCGGACTGGCATTAAAAAAAAGATACTGACTCTAATGGAATAATCGTTGGCGCCAGACTGAGGGGCGCAGGTTTATGTGGCACAAGGGTAGTCTATGGGACTGTGTGGATAAAGCAGCTCACAGTAGTGAGTGTAGGGTTAATACTAACTGTAACTTTAGCGCGGCGTGTGTAGCGCAGAGTCAGTGCAGAGTCAGTGCAGAGTCAGTGGAGCTTGTGTGCCTTACTATAAATCGGGGCACTGGGATATACAGACGGGTCAGTACATTTACCTGCTATTTATTCAAGGGATTATAGGGGCACAGGGTGTAGTGGATCAACTGTACAATGGAGCTGAATGGTCCCCCAAGTTCCCAGGTTCCTCATACCCCCACTTGTGCTCCATCACTTCCAATCACCGTGGCAGGTACTCTCCTGCGTGGCCCCCAGTTGCTGCTCCGCGCCGCAGAGAAGTATCCCCGCACCCCCAAGTGTGCCCGATGCAGGAATCACGGGGTAGTGTCCGCACTCAAGGGCCACAAGCGCTACTGCCGCTGGAAAGACTGTATGTGCGCAAAATGCACTCTGATCGCGGAGCGCCAGCGGGTGATGGCCGCGCAAGTTGCGCTCCGCAGGCAGCAAGCCCAGGAGGAAAACGAGGCCCGGGAGCTGCAGCTGCTCTATGGAACTGCCGAAGGACTAGCTCTGGCGGCAGCCAATGGCATCCTCCCACCCCGGCCAGCCTACGAGGTCTTCGGATCGCTGTGTGGCGAGGGAGGAACAGATTCAAAGATTCAAAAGTTTGACCTATTCCCAAAGAGCCTCATCCCCAGATCTATGACTCCTCAGCTGCCTTCTGGGGGGAAACCGGGGTCTCCAGACAGTGAACCGGTGTCAGGCAGTGCACCAGGTGCCTCATCCCCTGAGGCACAACCTGGTTCTGGCTCAGAAAATGGGGATGGTGAGTCCTTGCTCAGTTCCCCAATCTCTAAGGAGCTCAAGGAAGGAGAGGAGAGCCCAAGCTTAATCAGCCCCCTGAGCTCAGAATCTGGATCTGATGCTGAAAAAGATGAGCAGGATCCCAGTTCTTCCTCCTTAGCCAGGCAGAGGACCCCCATAAACATCCTGACCCGGGTCTTCCCCGCTCAGAAGAGGAGCGTCCTGGAACTGGTGCTGCAGGGTTGTGGGGGGGATGTGGTTCAAGCAATTGAACAGATACTGAACAACAGGAGTCAGGATAAGGGTGAAGGGACCTGGTCAAAAGATGGAGCCCTCCAGAGTATTCAGCCTTCTGTGTCCTCCACACACAGACCCCTTATTGCTGGGGCCCTTACTCCTGCTATTGGCACAATAGGGAGCAGGTCTGCATTCTCCCCTTTACAGCCCAATGCCGCACACTTTGGCACTGAAGCAAACACATACCAGCTAGGTGGGCACATTGGGTTGAACCCGTTGAGGTTGGCCTATTCTGCTCACAGTAGAGGACTTGCTTTTATGGCCCCTTACTCAACAGCTGGATTCATGCCTACCCTTGGCTTTCGCCCACCTATGGACTATGCCTTCAGTGACCTTATGAGGGACAGAGCCAATGTCCATAAGGACCAGGTATACACTAATGGACTCTATGGGCCAGTGGTCAATAATAATGCTGAAAAACAATGAATTCAGTATACAAGGAAGGGCATGACAGCTCTGGTTTTGCAGACTCGGATTTTGATTGCAGAGCATTGCTGTGGGATTAGATGACATTTGTCATAAAGTCTTAAGAATGTCTCATGTAAGTAAGACAACTGAGGCCCATTCTGGAGAAAGACCTAGTGAGGTAGAGTACTGTAAAGACATTCCTGTTCTCTGCAAGGCAACATGATGCTTTTGGATATGTGGAGGGTATGGATAATACTAAATCACTACAAATACAAACTGCACTTTTTCTATTAAAAAAGGGTTGACATTGTTTTTTTTTAAGGATATACGCATGGGCACAGCCCCAATCCATTGTGATATAAATATATACATATATAAATATATAGACTTCTAATGTTATGAGCTGGGATCCTAAGTTATTCTTGTAAGTGAACCTTTTTTAATGATAACAAGGAGCCATGCACTAACACATTCCAAGGTGCAGCACTAGAGACTGCTCTGTGTGTACAGATGTGGAGAGAAATGGGGGTGCAGCACTCAGACCCCCCCTCCTTTTGGTGAATCTCCAACTATTGCTGTTAGTGTAATTGTTTAGAAAATTGTTAAAACCTTTATGTGACCGTTCCCTAAGCGTTAGAAATAAATGTTATTTTCTAAAAAAAAAAAAAGAAAAC
Protein		Refseq >NP_001096543\|doublesex- and mab-3-related transcription factor A2 [Xenopus (Silurana) tropicalis] MELNGPPVSQLPQTATSTASLPVTVAGTLLRGPQLLLRAAEKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCMCAKCTLIAERQRVMAAQVALRRQQAQEENEARELQLLYGTAEGLALAAANGIIPPRPAYEVFGSVCTEGGTDSKIQKFDLFPKSLIPRSVTPQLSSGGKPVSPDSESVSGSAPGASSPEARPGSGSENGDGESLLSSPISKALKEGEESPSSISPLGSESGSDAEKDEQDPSSSSSARQRTPIDILTRVFPAQKRSVLELVLQGCGGDVVQAIEQILNNRGQDKSEETWSRDGALPSIQPSVSSTHRPLIAGALTPAIGTLGSRSAFSPLQPNGAHFGTEANAYQLGGHLGLNPLRLAYSAHSRGLAFMAPYSTAGFMPTLGFRPPMDYAFSDLMRDRANVHKDQVYTNGLYGPVVNNNAEKQ UniProtKB	Refseq >NP_001089148\|doublesex- and mab-3-related transcription factor A2 [Xenopus laevis] MELNGPPSSQVPHTPTCAPSLPITVAGTLLRGPQLLLRAAEKYPRTPKCARCRNHGVVSALKGHKRYCRWKDCMCAKCTLIAERQRVMAAQVALRRQQAQEENEARELQLLYGTAEGLALAAANGILPPRPAYEVFGSLCGEGGTDSKIQKFDLFPKSLIPRSMTPQLPSGGKPGSPDSEPVSGSAPGASSPEAQPGSGSENGDGESLLSSPISKELKEGEESPSLISPLSSESGSDAEKDEQDPSSSSLARQRTPINILTRVFPAQKRSVLELVLQGCGGDVVQAIEQILNNRSQDKGEGTWSKDGALQSIQPSVSSTHRPLIAGALTPAIGTIGSRSAFSPLQPNAAHFGTEANTYQLGGHIGLNPLRLAYSAHSRGLAFMAPYSTAGFMPTLGFRPPMDYAFSDLMRDRANVHKDQVYTNGLYGPVVNNNAEKQ UniProtKB

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.37810	Xl.51393 [+] Xl.70170
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		1 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human			DMRTA2
mouse		MGI	Dmrta2	All(5) Targeted, other(2)
zebrafish		ZFIN ZFIN ZFIN	dmrta2 dmrta2b dmrta2a	2 Lines(s)

Publications
First:
Most recent:
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Functional Ontologies
GO: Molecular:		DNA binding transcription factor activity
Biological:		regulation of transcription, DNA-dependent sex differentiation
Cellular Component:		nucleus
EC:
KOG:		[K] Transcription factor Doublesex

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.37810.1.A1_s_at [+] Str.37810.2.S1_s_at Str.37810.2.S1_at	Xl.15931.1.A1_at
Affymetrix 2.0			Xl2.15931.1.S1_at [+] Xl2.6850.1.A1_at Xl2.51393.1.S1_at Xl2.51393.1.S1_s_at

Symbol legend[+]