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Summary Expression Gene Literature (2) GO Terms (8) Nucleotides (153) Proteins (24) Interactants (24) Wiki
XB-GENEPAGE- 1005360

Gene Symbol: syvn1

Gene Name: synoviolin 1

Synonyms: hrd1 , syvn1-a , syvn1-b
Add Xenopus synonyms , Nomenclature history


Gene Function: E3 ubiquitin ligase

Protein Function:
Acts as an E3 ubiquitin-protein ligase which accepts ubiquitin specifically from endoplasmic reticulum-associated UBC7 E2 ligase and transfers it to substrates, promoting their degradation. Component o...[+]


Interactants: YYY

OMIM Disease Associations:
 
Xenbase Gene ID XB-GENE-1005361 XB-GENE-1005365 XB-GENE-6254740
Gene Symbol syvn1 syvn1.L syvn1.S
Chromosome scaffold_4 chr4L chr4S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0
Entrez Gene
Entrez Gene
Entrez Gene
mRNA Refseq Refseq Refseq
Protein Refseq TrEMBL Refseq Swiss-Prot Refseq Swiss-Prot TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v7.1 gene model
GBrowse
laevis genome v9.1 gene model
GBrowse
laevis genome v9.1 gene model
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.10714 Xl.18945 Xl.64351
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 2 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine syvn1 syvn1.L syvn1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards SYVN1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Syvn1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN syvn1 ZFIN Ensembl
chicken
GEISHA SYVN1 Ensembl
fruit fly
worm
WORMBASE
Publications
First: The endoplasmic reticulum-associated degradation of the epithelial sodium channel requires a unique complement of molecular chaperones. [Mol Biol Cell 2010]
Most recent: Processing and turnover of the Hedgehog protein in the endoplasmic reticulum. [J Cell Biol 2011]
View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 5 terms 8 terms 8 terms
EC
PANTHER syvn1
KEGG Pathways K10601 K10601 K10601
KOG [O] E3 ubiquitin ligase
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones   EXRC - 1 clone(s)  
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience Source BioScience
ORF syvn1 ORF1 syvn1 ORF2
Affymetrix 1.0 StrAffx.230.1.S1_s_at [+] Xl.18945.1.A1_at Xl.14438.1.A1_at
Affymetrix 2.0 Xl2.18945.1.S1_at Xl2.14438.1.S1_at

Symbol legend[+]

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