fga Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (38)

Nucleotides (542)

Interactants (64)

XB-GENEPAGE-478770

Gene Symbol: fga Gene Name: fibrinogen alpha chain Synonyms: Fibrinogen, A alpha polypeptide, fibrinogen Add Xenopus synonyms Gene Function: blood-clotting protein component Interactants: fgg(9) , nr3c1(7) , tf(6) , alb(4) , a2m(3) , ambp(3) , hhex(3) View All	1/2

XB-GENE-478771

XB-GENE-478775

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		NCBI Nucleotide >XM_002933489\|PREDICTED: Xenopus (Silurana) tropicalis fibrinogen alpha chain (fga), mRNA ATGCATCCTCTTAGAGAAGCAGAGAACTGTGGACCTAGTGCCAGACAAAGTCTGGTTGGAGACCATCATCTAGTCCAAACGAAGATGATTCAGAGGGTAGCCCTAATCACATTGCTGCTCTGCTTTGCAGGCAGTGTATGGTCTGAAGAAGAAGGTGGCATTGAAGCACAAGGAGGAAGCATACGTGGTCCTAGAATAATGGAAGCTAAAGCTGAATCTGATTGCAAACAAGACAAAAACTGGCCAATCTGTTCAGATGAAGACTGGGGTCCCAAATGTCCTTCTGGGTGCAGACTTCAAGGATTGGTTGATAAAACCGATAAAGATTTTGCCAAGAGAGTTGAAACAATTAAACAAAAACTAAAGGATGGAGAAAGCAGTCACAAAAGTATAGATCTGAAAACCAAGCAAACATATCAGTTCCTCAAGGATAACCTTGTACAGGCCCAGCAAAGCGATGGAAAGTATAATCAAGTGTCTGAAGACCTCAGAAAGAAAATCGAATATTTGAAGCTGAAAGTTTCCAATCAAGTAGAGAGAATAAAAGCACTTCAGAAAAACATCAGAGATCAGGTGGTGGAAATGAAACGTCTTGAGGTGGATATTGATATAAAAATCCGTGCTTGCAAAGGATCTTGTGCAAAGAACACTGACTACAAAGTGGACCATGACAGCTACAACAACATACAGAAACTACTCTTGCAAGCTGAAACCACTGACTTAAATAGCCAAATGAATGCCATACGAGTGCTTAAAATGAGGCCTATTAAGGACTCTCCTGTAGACTCTCGTTATAGAACACTGGCACTTGGCAAAGACCAAGAAGCAGAGTTCCCAATTTTCAAAGACATTAATCAATATGCATTTGTTTTAGAAGGGACAAAAGACGAGGTAAAAGGCTCATCTATGGGAACCTCATCTGTATTTCCTTCCGGCAGTGGGAAAGATGTAGTATTTCAAGGTTCTAAAATTTATGGCGATGACAAAAGTACACAGTCAGGGACAGTGACAGGGGGAGATCAGTCAACCAAAGTCATCACAGAAAGAACAGTTTCATGCACTAAGACAGTTAAGAGGAGGGTAGTATCCACGCCAGAAGGCCCTAAAGAAGAAATCACAGAAACATATAGTGGTGGTCCGGAGTGTGAAAAATTAGGAAAATTAAGCACAGATGACACTTTTCAAGGAGGGTCTGATGGAACTCGTGTTATCCACATTTCTGGAGGTAGTTCTTTAGGGGATATCAGTAAGATTCCTTCCTTTGAAGAGTTTTTAAGTTCATCTGGGAAAAAAACACAAACCAGCCAAACCAGTAGCAGTAGCAGTAGTAGTTCTAAGGTAACTCATGATGTTTTCACTGATTTGGGAGAAGATGAATTTGATGACTTTAGCCATACAGGACTTGATTCACCCAGCTTTACACCCCTCCAAAAAGAAGGCTCATCAACATTTACAAAGACTGTGGTCTCCAGCAGCAGCAGCAGGGGAAGCAGTAAAGATGGCACTCAGTTTGATATTAAATCTATGAAGAGTGGGCCAGTGTTTACCGACTTTGGCCCTATCCAGCACGATAATAGTGAAGAGGATAGGCCTGATTTCCAGGCCCGCACTGTGAGAAAAGAAATGAAGTTGGTTGGAGATTACACTGGGAAAGACTGTGATGATATCCGTCAAAAACACAGTTCTGGTGCCAAAAGTGGCATTTTCAAAATCAGGCCAGAAGGATCCACTAAGGTGCTATCAGTGTATTGCGACCAAGATACCCAGTTGGGAGGATGGATCTTGATTCAACAGAGACAAGACGGATCAGTAAATTTTAACAGGACCTGGCAAGACTACAAGAATGGATTTGGCAGTGTGGATGCCGGTGGAAAAGGAGAAGTCTGGTTGGGCAATGAAAATATTCATTTACTTACCCAAAAGGATACAATTCTTCGAATTGAGTTAGAGGACTGGTCAGGGGAGAAGGTTTATGCCGAATACAATATTCAGCTAGGGTCAGAAGCAGAGGGCTTTACTCTTAAAGTATCTCAGTATGAAGGCACGGCTGGAGATGCCTTGATAGAAGGATCTAAAGAGGATGGAGAGTACACATCCCACATTAACATGAAATTTAGCACATATGATAGGGACAGTGACAAGTGGGAGGAAAATTGTGCAGAAATGTATGGAGGGGGGTGGTGGTATAATAACTGCCAAGCTTCAAACCTTAATGGAATTTATTACATAGGAGGTCAATATGACCCAAGAAATAATTTTCCTTATGAGATTGAAAATGGAGTTGTTTGGGTACCTTTCAAAGCAGCAGATTATTCCCTTAAAACTGTCAGAATGAAAATGAGACCTGTTGAAACATCAGGTTAAGATATTTTCTCACAACCCCGCACTCTCATGAAAAGTTTAATGTATTATTATGTGTTTTTATTTCCTGGTGTAATATACTTTCCAATTGTAATCATGAACCAACTAAATAACTCATTTATATCTAATCAGC	Refseq >NM_001086860\|Xenopus laevis fibrinogen alpha chain (fga), mRNA ATCGAGTCCAAGCCAAGATGACTCAGTGGGCAGCCCTAATTACATTGCTTCTCTGCTTTGCAGGCAGTGTATGGTCTGAAGGAGAAGGCGGCATTGAAGCACAGGGAGGAAGCATACGTGGTCCTAGAATAATGGAATCGAAAGCAGAATCTGACTGCAAGCAGGAAAAGAACTGGCCTATCTGTTCAGATGAAGACTGGGGTCCCAAATGTCCTTCTGGGTGCAGAATTCAAGGATTAACTGATAAAACTGATAAAGATTTTGCCAAGAGAATTGAAACAATTAAACAAAAATTTAAGGATGGAGAAATCAGTTACAAAAGTATAGATGTGCAAACCAAGCAAACATATGAGAATCTCAAGAATAACCTTATACAAGCCCAGCAAAGTGACGGAAAGTATAATCAAGCATCTGAGGATCTCCGAAAGAAAATCGAATATTTAAAGCTGAAAGTTTCCAATCAAGTAGAACGAATAAAATCACTGCAAAGAAACATCAGAGATCAGGTGGTGGAAATGAAACGTCTTGAGGTTGACATTGATATAAAAATCCGTGCTTGTAAAGGATCTTGTGCAAAGAATACAGACTACAAAGTGGACCTTGACAGCTATAACAACATACAGAAACTACTCTTGCAAGCTGAAACCACAGACTTGAGTAACGAAATGAATTCCATACGCGTGCTAAAAATGAAGCCCATTAAGGATTCTCCTGTGGACTCTCGCTATAAAACACTGGCTCTTGACAAAGACCAAGAAGCAGAGTTTCCAATTTTCAAGGACATTAATCAATATTCATTTGTTTTAGAAGGGACAAAAGAAGAGGTAAAAGGCTCATCTATAGGAACCTCATCTGTTGTATTTCCTTCCGGCAGTGGGAAAGACGTAGATTTTCAAGGTTCCAAAGGAACACAGTCAGGGACAGTGAAAGGGGGAGATCAGTCAACCAAGGTCATCACAGAAAGTCGGACAGTTTCATGCACTAAGACTAAAAAGAAGAGGGTAATAATCACACCAGAGGGCCCTAAAGAAGAAATAATTGAATCATATAGTGGTGGTGCGGAGTGTGAAAAATTAGGAAAATTTAGCACAGGTGACACATTTGAAGCAGGGTCTGATGGAACTCGCGTTATCAAAATTTCTGGAAGTAGTTCTTTGGGAGATATCAGTAAAATTCCTTCCTTTGAAGAGTTTTTAAGCTCATCTGGGAAAAAAACACAAACCAGCCAAACCAGTAGCAGTAGTAGTAGTAGTAGTAGTAGTACCTATTCTAAGGGAGTAACTCACGATGCCTTTAGTGATCTGGGAGAAGACGAATTTGATGACTTTAGCCATACTGGACTTGATTCACCCAGCTTTACACCCATTCAAAAAGAAGGCTCATCTACATATACGAAGACTGTGGTTTCCAGCAGCAGCAGGGGAAGCACCAAAGATGGCACTCAGTTCGATATTAAATCTATGAAGAGTGGGCCAGTGTTTGATGACTTTGGCCCCATACAGCACGATAATAGTGAAGAGGACAGGCCTGATTTTCAGGCCCGCACTGTGAGAAAAGAAACGAAGTTGGTTGGAGATTACACTGGGAAAGACTGTGATGATATCCGTCAAAAACACAGTTCTGGTGCCAAAAGTGGCATTTTCAAAATCAGGCCAGAAGGATCCAGTAAGGTGTTAACAGTGTATTGCGATCAAGATACCCAGTTGGGAGGATGGATTTTGATTCAACAGAGAGAAGATGGATCAGTTAATTTTAACAGAACCTGGCAAGACTACAAGAATGGATTTGGCAGTGTGGATGCCAGTGGAAAAGGAGAAGTCTGGTTGGGCAATGAAAATATCCATTTACTGACCCAAAAGGATACATTTCTTCGAATTGAGTTGGAGGACTGGTCCGGGGAGAAGGCTTATGCTGAGTACAATTTCCAGCTAGGGTCAGAGTCAGAAGGCTTTATTCTTAAAGTATCTCAGTATGAAGGCACAGCTGGAGATGCCTTGATAGAAGGATCCAAAGAGGATGGAGAATACACGTCCCACTTTAACATGAAATTTAGCACATATGATAGGGACAGTGACAAGTGGGAGGAAAATTGTGCTGAAATGTATGGAGGGGGGTGGTGGTATAATAACTGCCAAGCTTCAAACCTTAATGGAATTTTTTACATTGGAGGTCAATATGACCCGAGAAACAGTGTTCCTTATGAGATTGAAAATGGAGTTGTTTGGGTACCTTTCAAAGCAGCAGACTATTCCCTTAAAACTGTCAGAATGAAAATTAGACCTGTTGAAACATCAGGTTAAGCTATATTCTTATAACCCCGCACTCCCATGAAAAGTTTAATGTATTATTATGTGTTTTTATTTCCTGGCTTACTATTTTCCATTTGTAATTATGAACCAACTAAATAATTCCTTTATGCCTAAAAAAAAAAAAAAAA
Protein		NCBI Protein >XP_002933535\|PREDICTED: fibrinogen alpha chain [Xenopus (Silurana) tropicalis] MHPLREAENCGPSARQSLVGDHHLVQTKMIQRVALITLLLCFAGSVWSEEEGGIEAQGGSIRGPRIMEAKAESDCKQDKNWPICSDEDWGPKCPSGCRLQGLVDKTDKDFAKRVETIKQKLKDGESSHKSIDLKTKQTYQFLKDNLVQAQQSDGKYNQVSEDLRKKIEYLKLKVSNQVERIKALQKNIRDQVVEMKRLEVDIDIKIRACKGSCAKNTDYKVDHDSYNNIQKLLLQAETTDLNSQMNAIRVLKMRPIKDSPVDSRYRTLALGKDQEAEFPIFKDINQYAFVLEGTKDEVKGSSMGTSSVFPSGSGKDVVFQGSKIYGDDKSTQSGTVTGGDQSTKVITERTVSCTKTVKRRVVSTPEGPKEEITETYSGGPECEKLGKLSTDDTFQGGSDGTRVIHISGGSSLGDISKIPSFEEFLSSSGKKTQTSQTSSSSSSSSKVTHDVFTDLGEDEFDDFSHTGLDSPSFTPLQKEGSSTFTKTVVSSSSSRGSSKDGTQFDIKSMKSGPVFTDFGPIQHDNSEEDRPDFQARTVRKEMKLVGDYTGKDCDDIRQKHSSGAKSGIFKIRPEGSTKVLSVYCDQDTQLGGWILIQQRQDGSVNFNRTWQDYKNGFGSVDAGGKGEVWLGNENIHLLTQKDTILRIELEDWSGEKVYAEYNIQLGSEAEGFTLKVSQYEGTAGDALIEGSKEDGEYTSHINMKFSTYDRDSDKWEENCAEMYGGGWWYNNCQASNLNGIYYIGGQYDPRNNFPYEIENGVVWVPFKAADYSLKTVRMKMRPVETSG	Refseq >NP_001080329\|fibrinogen alpha chain precursor [Xenopus laevis] MTQWAALITLLLCFAGSVWSEGEGGIEAQGGSIRGPRIMESKAESDCKQEKNWPICSDEDWGPKCPSGCRIQGLTDKTDKDFAKRIETIKQKFKDGEISYKSIDVQTKQTYENLKNNLIQAQQSDGKYNQASEDLRKKIEYLKLKVSNQVERIKSLQRNIRDQVVEMKRLEVDIDIKIRACKGSCAKNTDYKVDLDSYNNIQKLLLQAETTDLSNEMNSIRVLKMKPIKDSPVDSRYKTLALDKDQEAEFPIFKDINQYSFVLEGTKEEVKGSSIGTSSVVFPSGSGKDVDFQGSKGTQSGTVKGGDQSTKVITESRTVSCTKTKKKRVIITPEGPKEEIIESYSGGAECEKLGKFSTGDTFEAGSDGTRVIKISGSSSLGDISKIPSFEEFLSSSGKKTQTSQTSSSSSSSSSSTYSKGVTHDAFSDLGEDEFDDFSHTGLDSPSFTPIQKEGSSTYTKTVVSSSSRGSTKDGTQFDIKSMKSGPVFDDFGPIQHDNSEEDRPDFQARTVRKETKLVGDYTGKDCDDIRQKHSSGAKSGIFKIRPEGSSKVLTVYCDQDTQLGGWILIQQREDGSVNFNRTWQDYKNGFGSVDASGKGEVWLGNENIHLLTQKDTFLRIELEDWSGEKAYAEYNFQLGSESEGFILKVSQYEGTAGDALIEGSKEDGEYTSHFNMKFSTYDRDSDKWEENCAEMYGGGWWYNNCQASNLNGIFYIGGQYDPRNSVPYEIENGVVWVPFKAADYSLKTVRMKIRPVETSG

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.58330	Xl.47681
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		10 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	FGA	OMIM:202400 OMIM:105200
mouse		MGI	Fga	All(3) Targeted, knock Out(1) Targeted, other(2)
zebrafish		ZFIN	fga

Publications
First:		Glucocorticoids act together with estrogens and thyroid hormones in regulating the synthesis and secretion of Xenopus vitellogenin, serum albumin, and fibrinogen. [Dev Biol 1982]
Most recent:		Bacterial lipopolysaccharides stimulate production of XCL1, a calcium-dependent lipopolysaccharide-binding serum lectin, in Xenopus laevis. [Dev Comp Immunol 2013]
		View All Papers 2 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:
Biological:
Cellular Component:
EC:
KOG:		[R] Ficolin and related extracellular proteins

Reagents		tropicalis	laevis
Clones		EXRC - 1 clone(s)
		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.8667.1.S2_a_at [+] Str.8667.1.S1_at Str.8667.2.S1_at	Xl.26470.1.S1_at
Affymetrix 2.0			Xl2.47681.1.S1_at

Symbol legend[+]