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Summary Expression Gene Literature (131) GO Terms (18) Nucleotides (127) Proteins (52) Interactants (910) Wiki
XB-GENEPAGE-479054
Gene Symbol:
foxc1

Gene Name:
forkhead box C1

Synonyms:
igda , ihg1 , fkhl7 , irid1 , rieg3 , freac3 , freac-3 , xfd-11 , foxc1-a , foxc1-b ( Add synonyms , Nomenclature history )

Gene Function:
forkhead domain transcription factor

Protein Function :
DNA-binding transcriptional factor that plays a role in a broad range of cellular and developmental processes such as eye, bones, cardiovascular, kidney and skin development. Acts either as a transcrip...[+]



Interactants:
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Diseases: 


Disease Ontology:
iridogoniodysgenesis syndrome [+]

OMIM:
ANTERIOR SEGMENT DYSGENESIS 3; ASGD3 [+]

External Links:
1/8
 
Xenbase Gene ID XB-GENE-479055 XB-GENE-865236 XB-GENE-6252135
Gene Symbol foxc1 foxc1.L foxc1.S
Chromosome Chr6 chr6L chr6S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.1 Version 9.1
CDS Gene model Gene model Gene model
Entrez Gene 493250
734912
397996
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein RefSeq Swiss-Prot  More.. RefSeq Swiss-Prot  More.. RefSeq Swiss-Prot  More..
Genomic
X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine foxc1 foxc1.L foxc1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards FOXC1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Foxc1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Foxc1 Ensembl
zebrafish
ZFIN, AGR ZFIN, AGR foxc1b foxc1a ZFIN Ensembl
chicken
GEISHA FOXC1 Ensembl
fruit fly
worm
Publications
First Expression pattern of the winged helix factor XFD-11 during Xenopus embryogenesis., Mech Dev 1998      
Most Recent Lineage tracing of sclerotome cells in amphibian reveals that multipotent somitic cells originate from lateral somitic frontier., Dev Biol 2019          
All View All Papers 5 paper(s) referencing morpholinos 3 paper(s) referencing Disease Ontology
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 18 terms 14 terms 14 terms
PANTHER foxc1
KEGG Pathways K09396 K09396 K09396
KOG [K] Forkhead/HNF-3-related transcription factor (alt_id KOG:3563)
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks foxc1
Morpholinos foxc1 MO1 foxc1 MO1 foxc1 MO1
ORFs foxc1.L ORF1
Clones Horizon Source BioScience EXRC Horizon Source BioScience Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list