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Summary Expression Gene Literature (15) GO Terms (35) Nucleotides (8265) Proteins (61) Interactants (323) Wiki
XB-GENEPAGE-480745
Gene Symbol:
ybx1

Gene Name:
Y-box binding protein 1

Synonyms:
FRG Y , frog Y-box proteins , yb1 , bp-8 , csdb , dbpb , yb-1 , csda2 , nsep1 , nsep-1 , mdr-nf1 , frg y1 , frgy1 ( Add synonyms , Nomenclature history )

Gene Function:
transcription factor

Protein Function :
DNA- and RNA-binding protein involved in various processes, such as translational repression, RNA stabilization, mRNA splicing and transcription regulation. Binds preferentially to the 5'-[CU]CUGCG-3' ...[+]



Interactants:
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Diseases: 


External Links:
 
Xenbase Gene ID XB-GENE-480746 XB-GENE-865405 XB-GENE-17338642
Gene Symbol ybx1 ybx1.L ybx1.S
Chromosome Chr7 chr7L chr7S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 10.0 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 549431
379054
380022
mRNA RefSeq NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More.. RefSeq Swiss-Prot  More..
Genomic
X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine ybx1 ybx1.L ybx1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards YBX1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Ybx1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Ybx1 Ensembl
zebrafish
ZFIN, AGR ybx1 ZFIN Ensembl
chicken
GEISHA YBX1 Ensembl
fruit fly
worm
Publications
First Xenopus Y-box transcription factors: molecular cloning, functional analysis and developmental regulation., Proc Natl Acad Sci U S A 1990  
Most Recent A catalog of Xenopus tropicalis transcription factors and their regional expression in the early gastrula stage embryo., Dev Biol 2017          
All View All Papers
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 19 terms 20 terms 2 terms
PANTHER ybx1
KEGG Pathways K09276 K09276 K09276
KOG [J] Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks ybx1
ORFs ybx1.S ORF1
Clones Horizon Source BioScience Horizon Source BioScience Horizon
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info