Gene Symbol: hoxa6 Gene Name: homeobox A6 Synonyms: XlHbox 1, hoxc5-A, hoxb5-A, hbox2-A, hox1b, hox1.2 Add Xenopus synonyms Gene Function: homeodomain transcription factor Interactants: En2 Ab1(1) , agxt(1) , amh(1) , egr2(1) , en2(1) , fgf2(1) , hoxc6(1) View All

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1
		Entrez Gene
mRNA		NCBI Nucleotide >XM_002933395|PREDICTED: Xenopus (Silurana) tropicalis homeobox protein Hox-A9-like (LOC100485428), mRNA ATGTCGACTTCTGGGACCCTCAGCAATTATTATGTGGACTCTTTTCTAATTCACGAAGGGGACGATGTGGTGCAGCCTAGATTTGCCCCCGGATCCCTGACTCAGCCACCAAGGCAGGCAGCATCGGCCGAGCACCCCGACTTCACCCCTTGCAGCTTCCAATCCAAAACGTCAGTGTTCAGCAGCCCCTGGAACCCAGTGCACCCCCAAACTGCTAACAATGTGTCCAGTGTGTATCACCCCTATATGCACCACCAGCCCCCCATTTCAGCCTCTGACGGCAGGTACATGCGCTCTTGGCTGGACCCCATGGCTGCCGGATCCCTGCCCTTCCCCGGCTTCCCCTCCAGCAGGAGTTATGGCATCAAACCTGAACCGGTGGCTCCTAGAAGGGGCGACTGCTCCACATTCGATTCTCGCCCCCTGCCAGTGTCGGACTATCCGTGCGGCTCCCCCACTGACAGGGACAAGCAGATCGGCGACCCCCCGTTTGCTGTCACCAATGGAGAGAATCCCAGCAACGGAGAGAAGCCGCCAATTGATCCAAGTCCGGACAGAAAGAGGGGTCGCCAGACCTACACCCGTTACCAGACTCTGGAGCTGGAGAAAGAATTTCACTTTAATCGCTACCTAACCCGCAGGCGGAGAATAGAAATTGCACACGCCCTGTGTCTGACTGAAAGGCAGATCAAAATCTGGTTCCAGAACAGGAGAATGAAATGGAAGAAAGAACACAAGGAGGAAAAGCAAATGAGTTCGTACTTTGTGAATAGCACTTTCCCTGGGACTCTGCCCAATGGACAAGAGGCGTTTGTGGGGCAGATCCCCCTCTACTCATCTGGCTATGAAGCTTTAAGGCATTTTCCGGGCGCTTATGGGTCACCTCCTGTGCAGGACAAGCCCTACCCCTCACCCTGTTTCTACCAGCAGTCCAACACCCTTATTGCCTGCAATGGAAACTCTTATGAGTATGGGGCATCCTGCTTCTACTCGGGCAAGGAGAGCAGCGGCAGCCCGTCCTCATATGGGACTAAACACAGAGGGGACAGTGGGGAATATCTACATTTCTCCGCCGATCAGCAGCAATATAAATCTGCCAGTGCCCAAGGCAAGATGCTACATGAGGAACCCACCGACCGGAAGTACAGCAGCCCTGTCTATCCCTGGATGCAGAGGGTCAACTCTTGTACTGGTCCAGTGTATGGTGCCCATGGCAGGAGAGGGAGGCAGACCTACACCAGGTTCCAGACTTTAGAACTAGAGAAAGAATTTCATTTTAACAGATACCTGACCAGGAGGAGAAGGATTGAAATTGCTAATGCCCTTTGCCTCACGGAAAGACAGATCAAAATATGGTTTCAAAACAGAAGGATGAAATGGAAGAAAGAAAGCAAACTCCTGCTCCCATCCCACCCCAGCGACGACCCCTCAGAAGGCAAACAGGAGGAGAAAAGCACCACCTAA
Protein		NCBI Protein >XP_002933441|PREDICTED: homeobox protein Hox-A9-like [Xenopus (Silurana) tropicalis] MSTSGTLSNYYVDSFLIHEGDDVVQPRFAPGSLTQPPRQAASAEHPDFTPCSFQSKTSVFSSPWNPVHPQTANNVSSVYHPYMHHQPPISASDGRYMRSWLDPMAAGSLPFPGFPSSRSYGIKPEPVAPRRGDCSTFDSRPLPVSDYPCGSPTDRDKQIGDPPFAVTNGENPSNGEKPPIDPSPDRKRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKEHKEEKQMSSYFVNSTFPGTLPNGQEAFVGQIPLYSSGYEALRHFPGAYGSPPVQDKPYPSPCFYQQSNTLIACNGNSYEYGASCFYSGKESSGSPSSYGTKHRGDSGEYLHFSADQQQYKSASAQGKMLHEEPTDRKYSSPVYPWMQRVNSCTGPVYGAHGRRGRQTYTRFQTLELEKEFHFNRYLTRRRRIEIANALCLTERQIKIWFQNRRMKWKKESKLLLPSHPSDDPSEGKQEEKSTT

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC
Synteny		Metazome

Expression		tropicalis	laevis
UniGene
Unigene EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	HOXA6
mouse		MGI	Hoxa6	All(2) Targeted, knock Out(2)
zebrafish

Publications
First:		Differential utilization of the same reading frame in a Xenopus homeobox gene encodes two related proteins sharing the same DNA-binding specificity. [EMBO J 1988]
Most recent:		Planar induction of anteroposterior pattern in the developing central nervous system of Xenopus laevis. [Science 1992]
		View All Papers

Functional Ontologies
GO: Molecular:		DNA binding transcription factor activity
Biological:		regulation of transcription, DNA-dependent
Cellular Component:		nucleus
EC:
KOG:		[R] Transcription factor zerknullt and related HOX domain proteins

Reagents		tropicalis	laevis
Clones
Affymetrix 1.0		StrJgi.1032.1.S1_at [+] StrEns.1873.1.S1_s_at
Affymetrix 2.0

Symbol legend[+]

- Blast this sequence
   - Literature Or Expression Images