Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (53) GO Terms (24) Nucleotides (57) Proteins (33) Interactants (540) Wiki
XB-GENEPAGE-484635
Gene Symbol:
gata1

Gene Name:
GATA binding protein 1

Synonyms:
xGATA-1 , xgata1 , gata-1 , gata1-a , gata1-b ( Add synonyms , Nomenclature history )

Gene Function:
zinc finger transcription factor

Protein Function :
Transcription factor that acts synergistically with tal1/scl and lmo2 to specify embryonic dorsal mesoderm to a hematopoietic fate.


InterPro :
Transcription factor GATA , Znf GATA , Znf NHR/GATA , ADH C [+]

Interactants:
Loading ...

Diseases: 


Disease Ontology:
Down syndrome [+]

OMIM:
THROMBOCYTOPENIA, X-LINKED, WITH OR WITHOUT DYSERYTHROPOIETIC ANEMIA; XLTDA [+]

External Links:
1/2
 
Xenbase Gene ID XB-GENE-484636 XB-GENE-865107 XB-GENE-6252666
Gene Symbol gata1 gata1.L gata1.S
Chromosome scaffold_1716 chr8L chr8S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 100497467
373642
378511
mRNA NCBI Nucleotide RefSeq RefSeq
Protein NCBI Protein RefSeq Swiss-Prot  More.. NCBI Protein RefSeq  More..
Genomic
 X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine gata1 gata1.L gata1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards GATA1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Gata1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Gata1 Ensembl
zebrafish
ZFIN, AGR ZFIN, AGR gata1a gata1b ZFIN Ensembl
chicken
GEISHA GATA1 Ensembl
fruit fly
worm
Publications
First Expression of GATA-binding proteins during embryonic development in Xenopus laevis., Proc Natl Acad Sci U S A 1991          
Most Recent Caspase-9 has a nonapoptotic function in Xenopus embryonic primitive blood formation., J Cell Sci 2017                              
All View All Papers 6 paper(s) referencing morpholinos
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 21 terms 5 terms 4 terms
PANTHER gata1
KEGG Pathways K09182 K09182 K09182
KOG [K] GATA-4/5/6 transcription factors
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks gata1
Clones Horizon Source BioScience Horizon Source BioScience Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
Xenbase: The Xenopus Model Organism Knowledgebase.
Version: 4.15.0
Major funding for Xenbase is provided by grant P41 HD064556