Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (8) GO Terms (23) Nucleotides (55) Proteins (29) Interactants (148) Wiki
XB-GENEPAGE-485790
Gene Symbol:
hoxd9

Gene Name:
homeobox D9

Synonyms:
Xhoxd9 , hox4c , hox-4.3 , hox-5.2 ( Add synonyms , Nomenclature history )

Gene Function:
homeodomain transcription factor

Protein Function :
Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.



Interactants:
Loading ...

Diseases: 


External Links:
1/6
 
Xenbase Gene ID XB-GENE-485791 XB-GENE-17331257 XB-GENE-485796
Gene Symbol hoxd9 hoxd9.L hoxd9.S
Chromosome Chr9 chr9_10L chr9_10S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 100497640
108701382
100381176
mRNA NCBI Nucleotide NCBI Nucleotide RefSeq
Protein NCBI Protein TrEMBL NCBI Protein TrEMBL NCBI Protein RefSeq  More..
Genomic
X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine hoxd9 hoxd9.L hoxd9.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards HOXD9 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Hoxd9 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Hoxd9 Ensembl
zebrafish
ZFIN, AGR hoxd9a ZFIN Ensembl
chicken
GEISHA HOXD9 Ensembl
fruit fly
worm
Publications
First Complementary homeo protein gradients in developing limb buds., Genes Dev 1989            
Most Recent De novo transcription of multiple Hox cluster genes takes place simultaneously in early Xenopus tropicalis embryos., Biol Open 2019                                    
All View All Papers
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 22 terms 6 terms 6 terms
PANTHER hoxd9
KEGG Pathways K09294 K09294 K09294
KOG [K] Transcription factor Abd-B, contains HOX domain
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks hoxd9
ORFs hoxd9.S ORF1
Clones Horizon Horizon Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
Xenbase: The Xenopus Model Organism Knowledgebase.
Version: 4.15.0
Major funding for Xenbase is provided by grant P41 HD064556