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Summary Expression Gene Literature (6) GO Terms (5) Nucleotides (41) Proteins (19) Interactants (40) Wiki
XB-GENEPAGE- 485815

Gene Symbol: sim1

Gene Name: single-minded family bHLH transcription factor 1

Synonyms: Xsim , Xsim1
Add Xenopus synonyms , Nomenclature history


Gene Function: transcriptional regulator

Protein Function:


Interactants: YYY

OMIM Disease Associations: OBESITY LEANNESS, INCLUDED
 
Xenbase Gene ID XB-GENE-485816 XB-GENE-17346125 XB-GENE-17346126
Gene Symbol sim1 sim1.L sim1.S
Chromosome scaffold_5 chr5L chr5S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 9.1 JBrowse 9.1 GBrowse 6.0
Entrez Gene
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide
Protein NCBI Protein TrEMBL TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v7.1 gene model
GBrowse
laevis genome v9.1 gene model
GBrowse
laevis genome v9.1 gene model
Links
Genomic Synteny Genomicus   Metazome
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 3 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine sim1 sim1.L sim1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards SIM1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Sim1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN ZFIN sim1a sim1b ZFIN Ensembl
chicken
GEISHA SIM1 Ensembl
fruit fly
worm
WORMBASE
Publications
First: Characterization and developmental expression of xSim, a Xenopus bHLH/PAS gene related to the Drosophila neurogenic master gene single-minded. [Mech Dev 2000]
Most recent: Dissecting the pre-placodal transcriptome to reveal presumptive direct targets of Six1 and Eya1 in cranial placodes. [Elife 2016]
View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 0 term 5 terms 5 terms
EC
PANTHER sim1
KEGG Pathways K09100 K09100
KOG [K] Transcriptional regulator SIM1
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones EXRC - 1 clone(s)    
GE Dharmacon GE Dharmacon GE Dharmacon
Affymetrix 1.0 StrEns.657.1.S1_a_at [+]
Affymetrix 2.0

Symbol legend[+]

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