hrg Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (1)

Nucleotides (170)

Interactants (10)

XB-GENEPAGE-486130

Gene Symbol: hrg Gene Name: histidine-rich glycoprotein Synonyms: hrgp, fetuinish Add Xenopus synonyms Gene Function: Putative zinc transporter Interactants: ctbs(1) , darmin(1) , efnb1(1) , immp2l(1) , impdh2(1) , khdrbs1(1) , ndrg1(1) View All	1/3

XB-GENE-486131

XB-GENE-865580

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		NCBI Nucleotide >BC075450\|Xenopus tropicalis histidine-rich glycoprotein, mRNA (cDNA clone IMAGE:7017897), partial cds TTCAGAATGGAGCATGTGTTTATATTTGTTTTCTTTGCATTAGTGCCCTTGTGTATGGCTGCAAGCCCACCGTTACCTGTTGTAAACCCAATAGAATGTAACACTACAGATGCTGAAGCAGATGTAGCTTTGGATTTGATCAATGAAGATCGCCGCAAAGGCTTTGTACTGAAACCCCTGCGTGTTGTAGAGGCATATGAGCAGCATGTGCAGTCACATAAATATCCTGCAAGCACTATCTATTATCTAACTGTAGATGTTATGGAAACAAAATGTAGCGTCTTAAGTGGGAAGCTATGGGAAGACTGTGAAGAGCCAATGTCCTTCCATGAATGGGTATTTGGACAGTGCAAAGCCATCATTCTCATATCCTTGCCATGGAGGGTACAGAAACTGATCCACTACAGCTGCACTATTACTTCAGCTCATCCTAAAGTTATACTCGGCAAGTGCCCTGACTGCCCGCTTGCAGATGAAGAAATCACACCTACAACATTGGAGGAGGCCAAAATACTCATTGCAGAATACAACAAGGACAGCAACAACACCAATTATTTTAAAATTGACCATATAGAGAGAAGGAGATCACAGTGGGTGGTTGGCCCCTCCTCTTTCATCGAATTTAACATAAAGGAAACTGACTGCTCAAAAACTCAGGAAAATGTTATTCTTTCCAACTGCAATTTTCTAAATGATAGAGAGGCGCATGTTGGGTTTTGCTCTGGCAGCTTAATAAAGAATAACTTTGACGGGACAGAACACAAGCAAGTTTCCTGTGATATATATGAACCAAAGGATCACCATTCTCATTATCCTGATTATCATGGACCTTATGCATGCCATCCTGAAAGAGTAGATAACATACCCGAGGGTCAAGAAAATCCTGAGGCAGCAGTTCAGGAGAAGTCTCAGAGATGTAGACACCATCATAAACACAAACATCATCCTTCACACAAAGGTCATAAACATCATCATCATCATCATCATCCCCACCATCATGGCCATCCACCTCATCACCACCACCACCATCATCATCATCATCATCATCCAAATGATACCTCCTCTGAACGTCATGAACATCACCATCATCACCCAAACCATAACTCTACTGAACATCATGAACATCACCACCATCACAAAAATCATTCCTCCTCCGAGCACCATGGCAGTTCATCTGAAGAACATACTGACAAGAAAGCTGACAAGAAAACTTTTATGAGGAGGTCCAAAGGGGTAGTTCAAAAAGTCACTCTTAGTAATGAAACTGATGTTCTTCCAGCTCCCACCATTCCTCCATTACCAAGCCGTCCTGGTTTTAGAACTGAGTATATTCAGTTCCCAGAATCTAAATCACATCTGTCAACATGTCCTTGGACAATTGAAGAGAAACAAGAGATTCTACCATTTTTACCACATGGAAAATAATGCATCAATATTTCAAACACAGGTGGTAAAAAATAAATTTTTTTCTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	Refseq >NM_001086036\|Xenopus laevis histidine-rich glycoprotein (hrg), mRNA GAATTCCCCGGGCTCATTCATAATGAAGTGTGTTTTTATAGTAGTCTTGTTTGGGCTAGTGCCCTTGTGTAAGGCTACAAGCCCAGTGTTTCCTGTTGTAGACCCAATACAATGTAATACTACAGAATCGGAAGTACATGTAGCTTTGGATTTGATCAATGAAGATCGTCGTGAGGGCTTTATATTCAAACCCCTGCGTGTCGTAGAGGCATATGAGCAGCATGTAAAGTCACATAAATATCCTGCAAGCACTATCTATTATCTAACTATAGATGTTTTGGAAACAAAATGCAGTGTCTTAAGTGGGAAGCCATGGGAAGAATGTGAAGAGCCATATTCCTTACATGAATGGGTCTTTGGAGAGTGCAAAGCCATCATTCTCATATCCTTGCCATGGAGGGTACAGAAATTGATCAGCTACAACTGCACTATTACTTCAGTTCATCCTGGAGTTATACTCAGCACGTGCCCTGACTGCCCGACTGCAAACGAAGAAATCACACCCACAATAACAGAGACGGCCGACACGCTGATTGCAGAATACAACAAGGACAGCAACAACACCAGATATTTTAAAATCGACCATATAGAGAGAGTGAGATCACAGTGGGTGGTTGGTCCCTCCTATTTCATCCAGTTTACCATAAAGGAAACTGACTGCATGAAAACACAGGAAAATGTTGTTCTTTCCAACTGCAATTTTCTAGATGACAGAGAAGCACATGTTGGGTTTTGCTCTGGAAGCATGATGAACAGCACTTTCGATGGTACAGAACACAAGGAAGTTTCCTGCGATATATATGAACCCAAGGATGATCATTCTCATTATCCTGATGATCATGGACCTTATGCCAGTCATCGTGAAATAGAAGTCAACATACCTGAGGGTCAGGAAAAACCAGAGGCAGCAGTTCAGGAGAAGTCTCAGGATAAGTCTCAGAAAGGTAGACACCATCATAAACACAGACATCATCCTTCACACAAAGGTCATAAACATGGTCGTCGTCATCATCATCATCATCCCCACCATCATGACCATCCACCTCATCATCATCACCACCACCATCATCATCATCCAAATCACACTTCCTCTGAACACCATGAACATCACCATCATCATCCAAATCATACTTCCTCTGAACATGGCAGTTCATCAGAAGAACATACTGACAAGAAAGCTGGGAAGAAAGCTGACAGGAAATGTTTTATGACGAGGTCTAAAGGGGTAGTTCAAAAAATCACCCTTGCTAGTGAAACGGATGTTCTTCCAGCTCCCACCATCACCATTAGCCGGCCTAGTTTTAGAACTGAGTATATTCAGTTCCCAGAAGCTGCATCACATCTGCCAACATGCCCTTGGACAATCGAAGAGAAAGAAGAGATTGTACCATTTTTGCCACATGAAAAATAATGCATCAAGATTTCAAACCACATTTAGTTGGTAAAAAATAAAATGTTATCTTTTAAAAAAAAAAAAAAAAAAAAA
Protein		NCBI Protein >AAH75450\|hrg protein [Xenopus (Silurana) tropicalis] FRMEHVFIFVFFALVPLCMAASPPLPVVNPIECNTTDAEADVALDLINEDRRKGFVLKPLRVVEAYEQHVQSHKYPASTIYYLTVDVMETKCSVLSGKLWEDCEEPMSFHEWVFGQCKAIILISLPWRVQKLIHYSCTITSAHPKVILGKCPDCPLADEEITPTTLEEAKILIAEYNKDSNNTNYFKIDHIERRRSQWVVGPSSFIEFNIKETDCSKTQENVILSNCNFLNDREAHVGFCSGSLIKNNFDGTEHKQVSCDIYEPKDHHSHYPDYHGPYACHPERVDNIPEGQENPEAAVQEKSQRCRHHHKHKHHPSHKGHKHHHHHHHPHHHGHPPHHHHHHHHHHHHPNDTSSERHEHHHHHPNHNSTEHHEHHHHHKNHSSSEHHGSSSEEHTDKKADKKTFMRRSKGVVQKVTLSNETDVLPAPTIPPLPSRPGFRTEYIQFPESKSHLSTCPWTIEEKQEILPFLPHGK	Refseq >NP_001079505\|histidine-rich glycoprotein precursor [Xenopus laevis] MKCVFIVVLFGLVPLCKATSPVFPVVDPIQCNTTESEVHVALDLINEDRREGFIFKPLRVVEAYEQHVKSHKYPASTIYYLTIDVLETKCSVLSGKPWEECEEPYSLHEWVFGECKAIILISLPWRVQKLISYNCTITSVHPGVILSTCPDCPTANEEITPTITETADTLIAEYNKDSNNTRYFKIDHIERVRSQWVVGPSYFIQFTIKETDCMKTQENVVLSNCNFLDDREAHVGFCSGSMMNSTFDGTEHKEVSCDIYEPKDDHSHYPDDHGPYASHREIEVNIPEGQEKPEAAVQEKSQDKSQKGRHHHKHRHHPSHKGHKHGRRHHHHHPHHHDHPPHHHHHHHHHHPNHTSSEHHEHHHHHPNHTSSEHGSSSEEHTDKKAGKKADRKCFMTRSKGVVQKITLASETDVLPAPTITISRPSFRTEYIQFPEAASHLPTCPWTIEEKEEIVPFLPHEK

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.24491 [+] Str.44775 Str.71254	Xl.5948 [+] Xl.78320
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		7 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	HRG
mouse		MGI	Hrg	All(4) Targeted, knock Out(2) Targeted, other(2)
zebrafish

Publications
First:		Novel gene expression domains reveal early patterning of the Xenopus endoderm. [Gene Expr Patterns 2003]
Most recent:
		View All Papers

Functional Ontologies
GO: Molecular:		cysteine protease inhibitor activity
Biological:
Cellular Component:
EC:
KOG:		[P] Putative zinc transporter

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.24491.1.S1_at	Xl.5948.1.S1_at
Affymetrix 2.0			Xl2.5948.1.S1_at

Symbol legend[+]