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Summary Expression Gene Literature (10) GO Terms (9) Nucleotides (109) Proteins (42) Interactants (261) Wiki
XB-GENEPAGE-487031
Gene Symbol: sox5

Gene Name: SRY-box 5

Synonyms: XSox-5 ( Add synonyms , Nomenclature history )

Gene Function: HMG-box transcription factor

Protein Function :
Binds specifically to the DNA sequence 5'-AACAAT-3'.

InterPro : HMG box dom sf , HMG box dom , SOX-5/6

Interactants: Loading ...
Diseases:  OMIM: LAMB-SHAFFER SYNDROME; LAMSHF

External Disease Links: ClinVar, MalaCards, KEGG Disease, DECIPHER
1/5
 
Xenbase Gene ID XB-GENE-487032 XB-GENE-17330161 XB-GENE-865667
Gene Symbol sox5 sox5.L sox5.S
Chromosome scaffold_323 chr3L chr3S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 100038209
108710702
100381154
mRNA RefSeq NCBI Nucleotide RefSeq
Protein RefSeq Swiss-Prot TrEMBL NCBI Protein RefSeq Swiss-Prot Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine sox5 sox5.L sox5.S
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards SOX5 OMIM Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Sox5 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR sox5 ZFIN Ensembl
chicken
GEISHA SOX5 Ensembl
fruit fly
worm
WORMBASE
Publications
First Hypaxial muscle migration during primary myogenesis in Xenopus laevis., Dev Biol 2001              
Most Recent The neural border: Induction, specification and maturation of the territory that generates neural crest cells., Dev Biol 2018      
All View All Papers 2 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 7 terms 0 term 5 terms
PANTHER sox5
KEGG Pathways K09269 K09269
KOG [K] HMG-box transcription factor SOX5
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks sox5
Morpholinos sox5 MO1 , sox5 MO2 , sox5 MO3 , sox5 MO4 sox5 MO1 , sox5 MO2 , sox5 MO3 , sox5 MO4 sox5 MO1 , sox5 MO2 , sox5 MO3 , sox5 MO4
Clones Horizon Source BioScience Horizon Horizon Source BioScience

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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Version: 4.13.1
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