actg1 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

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Nucleotides (5315)

Interactants (0)

XB-GENEPAGE-491617

Gene Symbol: actg1 Gene Name: actin, gamma 1 Add Xenopus synonyms Gene Function: cytoskeletal constituent Interactants:

XB-GENE-491618

XB-GENE-866078

XB-GENE-6464325

Molecules		tropicalis	laevis a		laevis b
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene		Entrez Gene
mRNA		Refseq >NM_204001\|Xenopus (Silurana) tropicalis actin, gamma 1 (actg1), mRNA CAGCGGACTTGACAGCTACTCCCCGCTCTTTGTAACAACTTGCCAGCTTTGCATTTCTCCTCTTAAGGAAACCTCCAGCACCAAGAAATAAAATGGATGAGGAAATTGCAGCACTCGTCGTTGACAATGGCTCTGGAATGTGCAAAGCCGGCTTTGCTGGAGATGATGCTCCCCGTGCTGTGTTCCCCTCTATTGTTGGACGCCCAAGACACCAGGGTGTAATGGTTGGTATGGGCCAGAAGGACAGCTATGTAGGTGATGAAGCCCAAAGCAAGAGGGGTATCCTTACCCTTAAGTATCCAATTGAACACGGAATTGTTACAAACTGGGATGATATGGAGAAGATTTGGCATCACACCTTCTACAATGAGCTTCGTGTAGCCCCTGAAGAGCACCCAGTCCTGCTTACAGAAGCTCCCCTGAACCCCAAAGCCAACAGAGAAAAGATGACACAGATCATGTTTGAGACTTTCAACACCCCAGCTATGTATGTCGCCATTCAAGCTGTGCTGTCTCTGTATGCCTCTGGTCGTACCACTGGTATCGTGATGGACTCTGGAGATGGTGTCACCCACACAGTACCCATTTATGAAGGTTATGCCTTGCCCCATGCTATCCTGCGTCTGGACTTGGCTGGTCGTGACCTGACAGACTACCTCATGAAAATCCTGACCGAAAGAGGCTACAGCTTCACCACCACAGCTGAGAGAGAAATTGTGCGTGACATCAAGGAGAAACTCTGCTATGTTGCTCTTGACTTTGAACAAGAGATGGCAACTGCTGCATCCTCCTCATCCTTGGAAAAGAGCTACGAACTGCCTGATGGACAAGTAATTACAATTGGAAATGAGAGGTTTAGATGCCCAGAGGCACTCTTCCAGCCTTCCTTCCTGGGTATGGAATCATGTGGCATCCATGAAACTACATTCAACTCAATCATGAAGTGTGATGTTGACATCCGTAAGGACCTGTATGCCAACACTGTCCTGTCCGGAGGTACCACAATGTATCCTGGTATTGCTGACAGAATGCAGAAGGAAATCACTGCCTTGGCCCCCAGCACCATGAAAATTAAGATCATTGCCCCACCTGAACGCAAATACTCTGTCTGGATTGGTGGCTCTATCCTGGCCTCCCTCTCCACTTTCCAGCAGATGTGGATCAGCAAGCAGGAGTATGATGAATCTGGCCCATCCATTGTCCACCGCAAATGCTTCTAAATGGACTGCTAGCAGATGCGTTGCATTTGCTGCGTGAGTTCTTCAAAGTATTAATTTGCCTTGGCAAATGTGTACGCCTCATGCTAGCCTCTTGAAACTGGAAAAAGGGCCAACTTCCAAATGAACTTATCCTAGGAATTGGAGACACACATAGTCACTGTTGGGGGATTTTGTAATGCAAGACTTGTGCTTGTCTCTTCAAATCATTCCTGTGGCATCAATGCTAGCATATTGTACCCTGTACACATCTCTTATATTGCCTGGTTGGCATACAGTCTGGGTGACACTTAAGCTAAGCTTTACGTAGAAAGAAGCATTTCTGTGAAAGGCTGCCGATCTGCGACAGTATTGCGAATGACACTTCTCCTCTAGGTTACAGGGGCTGTTTATGGAGAAGTCGAGTTTTGGAGATGTGTACAGGGTATCTGAGGTTTAGACTTCCACACACAGTTAAGCGCTTAATACTCCATTGTTTCATGTCGGAGGCTGGTCAGTTCATGAAGGAATCTCTTCTATCTTTCCAGTTTATAGTAAGGTTGGAAATTGACACTCAGGCCCAAGAACCAGTCTTTTTCTTAACCCAGGTTGTATTCCCAACATTCAAAATGGGTCTGAAGAAAGTTACAAATGTTGCAGTTAACACCTGTAAATTTATGCATCCAAGTTAATTTATGTAAATTTTTTTGTATGTTGCCTTAATGTTCTCACAACGTAGAAAACCAAAATTTGTATGTCATCCAGATGAGAATTGTAACTTCCAAAACACCGTTCTGTAAGGATAAAATAAAGCGCTGCAGTAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	Refseq >NM_001096383\|Xenopus laevis actin, gamma 1 (actg1-a), mRNA GTGGCAGCGGATCTGACAGCTACTGCTTTTGTAACAGCCTTGCCAACTTTGATTATTTTTCCGTTAAGGAAATCTCTAGTTCCAAGAATTAAAGATGGCAGAAGAAGAGATTGCAGCGCTCGTCATTGACAATGGCTCTGGAATGTGCAAAGCCGGCTTTGCTGGAGATGATGCTCCCCGTGCTGTGTTCCCTTCTATTGTTGGACGCCCAAGACACCAGGGTGTAATGGTTGGTATGGGCCAGAAGGACAGCTATGTAGGTGATGAAGCCCAAAGCAAGAGAGGTATCCTAACCCTTAAGTATCCAATTGAACATGGAATTGTCACAAACTGGGATGATATGGAGAAGATCTGGCATCACACCTTCTACAATGAACTTCGTGTAGCCCCAGAAGAGCACCCAGTCCTGCTTACAGAAGCTCCCCTGAACCCCAAAGCCAACAGAGAAAAGATGACGCAGATCATGTTTGAGACTTTTAACACCCCAGCTATGTATGTTGCCATTCAAGCTGTGCTGTCTTTGTATGCCTCTGGTCGTACCACTGGTATTGTGATGGATTCTGGAGATGGTGTCACCCACACAGTACCCATTTATGAAGGTTATGCCTTGCCCCATGCTATCCTGCGTCTGGACTTGGCTGGTCGTGACCTGACGGACTACCTCATGAAAATCCTGACCGAAAGAGGCTACAGCTTCACAACCACAGCTGAGAGAGAAATTGTGCGCGACATCAAGGAGAAACTCTGCTATGTTGCTCTTGACTTTGAGCAAGAAATGGCAACTGCTGCATCCTCCTCATCCCTGGAAAAGAGCTATGAACTGCCTGATGGACAAGTAATCACAATTGGAAATGAGAGATCCAGGTGCCCAGAGGCACTCTTCCAGCCTTCCTTCCTGGGTATGGAATCTTGTGGCATCCATGAAACCACATTCAATTCAATCATGAAGTGTGATGTTGACATCCGTAAGGACCTGTATGCCAACACTGTCCTGTCTGGAGGTACCACAATGTATCCTGGCATTGCTGACAGAATGCAGAAGGAGATCACTGCCTTGGCCCCCAGCACAATGAAAATCAAGATCATTGCCCCACCTGAACGTAAATACTCTGTCTGGATTGGTGGCTCTATCCTGGCCTCACTCTCCACTTTCCAGCAGATGTGGATCAGCAAGCAGGAATATGATGAATCTGGCCCATCCATTGTCCACCGCAAATGCTTCTAAACGGACTGCTAGCAGATGCGTTGCATTTGCTGCGTGAGTTCTTCAAAAGTGTTAAATTTGCCTTGACAAATGTGTACGCCTCATGCTAGCCTCTTGAAACTGGAATAAGGGCCAACTTCCAAATTAACTTATCTTGGGAATCTGAGACGGTCACACTGCTGGGGATTTTGTAATGCAAGACTTGTCTGTCTCCAGATCATTCCCGTGACATCAATGCTAGCATATCGTACCCTGTACACATCTCTTATACAGTGCCTGGTTGGCATACAGTCTAGGTGACACTTAAGCTAAGCTTTACGTAGACTGAAGCATTTCTGTGAAAGGCTGCCAATCTGCGACAGTATTGCGAATGACACTTCTCTAAGTTACAGGGGCTGTTTACAGAAGTTGAGTTTGGAGATGTGTACAGGGTATCTTGAGGTTTAGGCTTCCACATAATGGTTAAAGCGCTTAATATTCCATTTCACATCAGAGGTTGGTGAGTTCATGAAGGAATCACTTCTATCTTTCCAGTTAAAGTCAGGTTTGAAATTGAGGGGGGGGGAGCAGTCTTTCTTTAACCCAGGTTGTATTCCCAACATTCAAAATGGGTCTGAAGAAAAGTTACAAATGTTGCAGCAGTTACACCTGTAAATTTATGCATCAGTTAATTTATGTATTGTATGTTGCCTTAATGTTCTCACAAAGTGGAAAACCAAAATTTGTATCTATCATCCAGATGAGAAATGAAACGCCCAAAACATTCTGTATGGATAAAATAAAGCGCTGCAGTAAAAAAAAAAAAAAAAAAAAAAAAA		Refseq >NM_001172163\|Xenopus laevis actin, gamma 1 b (actg1b), mRNA ATGGCAGATGAAGAGATTGCAGCGCTCGTCATTGACAATGGCTCTGGAATGTGCAAAGCTGGCTTTGCTGGAGATGACGCTCCCCGTGCTGTGTTCCCCTCTATTGTTGGACGCCCAAGGCACCAGGGTGTAATGGTTGGTATGGGCCAGAAGGACAGCTATGTAGGTGATGAAGCCCAAAGCAAGAGAGGTATCCTGACCCTTAAGTATCCAATTGAACATGGAATTGTTACAAACTGGGATGACATGGAGAAGATCTGGCATCACACCTTCTACAATGAGCTTCGTGTAGCCCCAGAAGAGCATCCAGTCCTGCTTACAGAAGCTCCCCTGAACCCCAAAGCCAACAGAGAAAAGATGACCCAGATCATGTTTGAGACTTTCAACACCCCAGCTATGTATGTTGCCATTCAAGCTGTGCTGTCTCTGTATGCCTCTGGTCGTACCACTGGTATCGTGATGGACTCTGGAGATGGTGTCACCCACACAGTACCCATTTATGAAGGTTATGCCTTGCCCCATGCTATCCTGCGTCTGGACTTGGCTGGTCGTGACCTGACAGACTACCTCATGAAAATCCTGACTGAAAGAGGCTACAGCTTCACCACCACAGCTGAGAGAGAAATTGTGCGTGACATCAAGGAGAAACTCTGCTATGTTGCTCTCGACTTTGAGCAAGAGATGGCAACTGCTGCATCTTCCTCATCCCTGGAAAAGAGCTATGAACTGCCTGATGGCCAAGTAATCACAATTGGAAATGAGAGGTTCAGATGCCCAGAGGCACTCTTCCAGCCATCCTTCCTGGGTATGGAATCATGTGGCATCCATGAAACCACATTCAACTCTATCATGAAGTGTGATGTTGACATCCGTAAGGACCTGTATGCCAACACTGTCTTGTCTGGAGGTACCACTATGTATCCTGGTATTGCTGACAGAATGCAGAAGGAAATTACTGCCTTGGCCCCCAGCACAATGAAAATTAAGATCATTGCCCCGCCTGAACGCAAATACTCTGTCTGGATTGGTGGATCTATCCTGGCCTCACTCTCCACTTTCCAGCAGATGTGGATCAGCAAGCAGGAATATGATGAATCTGGCCCATCTATTGTCCACCGCAAATGCTTCTAA
Protein		Refseq >NP_989332\|actin, cytoplasmic 2 [Xenopus (Silurana) tropicalis] MDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF UniProtKB	Refseq >NP_001089852\|actin, cytoplasmic type 8 [Xenopus laevis] MAEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERSRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF UniProtKB		Refseq >NP_001165634\|actin, cytoplasmic type 5 [Xenopus laevis] MADEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKCF UniProtKB

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis a		laevis b
UniGene		Str.6666 [+] Str.5528 Str.37622 Str.42046 Str.45903 Str.49552 Str.53707 Str.65384 Str.62488 Str.83197	Xl.29221 [+] Xl.57286 Xl.76671		Xl.76282
Unigene EST Profile		EST Profile	EST Profile		EST Profile
GEO data			GEO		GEO
Images		3 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	ACTG1	OMIM:604717
mouse		MGI	Actg1	All(4) Targeted, other(2) Targeted, knock Out(2)
zebrafish

Publications
First:
Most recent:
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Functional Ontologies
GO: Molecular:		motor activity protein binding structural constituent of cytoskeleton
Biological:
Cellular Component:		actin filament
EC:
KOG:		[Z] Actin and related proteins

Reagents		tropicalis	laevis a		laevis b
Clones		open biosystems	open biosystems		open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes		geneservice/RZPD imagenes
Affymetrix 1.0		Str.6666.1.S1_at [+] Str.42046.1.S1_at Str.49552.1.A1_at Str.37622.1.A1_at Str.42324.2.A1_x_at Str.39767.2.A1_at Str.42324.1.A1_x_at Str.42324.3.A1_x_at Str.39767.1.S1_at Str.44360.1.A1_at Str.45903.1.A1_x_at Str.5528.1.A1_x_at Str.5528.1.A1_at	Xl.5846.2.A1_at
Affymetrix 2.0			Xl2.29221.2.S1_at [+] Xl2.29221.1.S1_at Xl2.29221.1.S1_a_at Xl2.5438.2.A1_at

Symbol legend[+]