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Summary Expression Gene Literature (133) GO Terms (2) Nucleotides (990) Proteins (53) Interactants (964) Wiki
XB-GENEPAGE-493023
Gene Symbol: vim

Gene Name: vimentin

Synonyms: vimentin , vim-a , vim-b ( Add synonyms , Nomenclature history )

Gene Function: intermediate filament

Protein Function :
Vimentins are class-III intermediate filaments found in various non-epithelial cells, especially mesenchymal cells. Vimentin is attached to the nucleus, endoplasmic reticulum, and mitochondria, either ...[+]

InterPro : Znf RING , APC su10/DOC dom , PHR sf , Ig E-set , RCC1/BLIP-II , Galactose-bd-like sf , Reg chr condens , PHR , Znf RING/FYVE/PHD , Filamin/ABP280 repeat-like , Carboxylesterase B AS , AB hydrolase , CarbesteraseB , BAL , Intermed filament DNA-bd , IF conserved , IF rod dom coil1B , Vimentin , IF rod dom , HLH DNA-bd sf , Orange dom , bHLH dom , TSP1 rpt , TSP1 rpt sf , PLAC , ARM-type fold

Interactants: Loading ...
Diseases:  Disease Ontology: cataract 30

OMIM: CATARACT 30, MULTIPLE TYPES; CTRCT30

External Disease Links: ClinVar, MalaCards, KEGG Disease, DECIPHER
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Xenbase Gene ID XB-GENE-493024 XB-GENE-866225 XB-GENE-6255792
Gene Symbol vim vim.L vim.S
Chromosome Chr06 chr6L chr6S
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2 Version 9.2
CDS Gene model Gene model Gene model
Entrez Gene 496727
386601
386600
mRNA RefSeq RefSeq RefSeq
Protein RefSeq TrEMBL TrEMBL RefSeq Swiss-Prot Swiss-Prot Swiss-Prot RefSeq TrEMBL TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine vim vim.L vim.S
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards VIM OMIM Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Vim MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR vim ZFIN Ensembl
chicken
GEISHA VIM Ensembl
fruit fly
worm
WORMBASE
Publications
First Widespread occurrence of intermediate-sized filaments of the vimentin-type in cultured cells from diverse vertebrates., Exp Cell Res 1979  
Most Recent The interconnection between cytokeratin and cell membrane-bound β-catenin in Sertoli cells derived from juvenile Xenopus tropicalis testes., Biol Open 2019                                  
All View All Papers 5 paper(s) referencing morpholinos 1 paper(s) referencing OMIMs 5 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 2 terms 1 terms 2 terms
PANTHER vim
KEGG Pathways K07606 K07606 K07606
KOG [DY] Nuclear envelope protein lamin, intermediate filament superfamily
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks vim
Antibodies Vim Ab1 , Vim Ab2 , Vim Ab3 , Vim Ab4 Vim Ab2 , Vim Ab3 , Vim Ab4 , Vim Ab1 Vim Ab2 , Vim Ab3 , Vim Ab4 , Vim Ab1
ORFs vim.L ORF1 , vim.L ORF2 , vim.L ORF3 vim.S ORF1 , vim.S ORF2
Clones Horizon Source BioScience Horizon Source BioScience Horizon Source BioScience

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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