mrc1 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (8)

Nucleotides (102)

Interactants (32)

XB-GENEPAGE-494274

Gene Symbol: mrc1 Gene Name: mannose receptor, C type 1 Synonyms: mmr, cd206, clec13d Add Xenopus synonyms Gene Function: sugar binding Interactants: antxr1(2) , atr(2) , chek1(2) , clspn(2) , abcc8(1) , act3(1) , actb(1) View All

XB-GENE-494275

XB-GENE-6255360

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		NCBI Nucleotide >XM_002939002\|PREDICTED: Xenopus (Silurana) tropicalis macrophage mannose receptor 1-like (LOC100493504), mRNA ATGTCGGCCTTACCTATTCTAATCCTGCTCTCCATCGTTCAGCCTTCACTTCAGCTGGATTCTTCTATATTTTCCATATACAATGAAGAGCATAAGGTGTGCTTACAAGCTCAGATTTCTGGAGCCATCGTGACTGCCCCTTGTAAAGATAATAATGACTTACAGAAATTTAGGTGGATTTCTTTACACCAGTTAGTAAATGTTGGCGTTAAACAGTGCCTGGGGGCAACTGCTAAAAAGGACATGGCAGTCGTCACTACTTACTCTTGTGATGGGACGAGCGAGCTTCAGAAATGGGAATGTAAAAATGATACACTTTTTGGAATCCAAGGAGATACCCTGCACTTGAATTATGGCAACGTGCAACATAAAGTTATCCTTTACAAAGGAACTGGACTGTGGAGTAGATGGAAGGTGTATGGAACAACGGATGACCTGTGCACTAAGGCCTATGAAGATGTATACACGTTACTTGGGAATGCAAATGGTCAGCCATGTGTATTCCCCTTTAAATTTCAAACTAAATGGCATGCAGACTGCACATTGGAAGGAAGATCCGACGGGAGGCGGTGGTGTTCGACAACTTCAGATTACAACAAAGACAAGTTATACGGGTTCTGCCCATCTACATCTATTAGTGATACGTGGTGGACTACAGATTCAGTTACAGGAGTCCATTACCAGATAAACAACCAGGCAGCGCTCACTTGGTTTCAGGCACGGAAGAGCTGTTTACAACAGGAATCTGAATTATTAAGCATCACTGAGATCCACGAGCAAACGTTTCTCACAGGCTTATCCAATACAATGACTACATCTCTCTGGACTGGACTTAATAGTTTGAATTTCAATGCAGGCTGGCAGTGGAGTGGTGGAAGTCCATTTCGTTATCTAAATTGGGTTCCAGGAAATCCTTCATCTGAACCTGGGATAAATTGTGTGACACTAAATACAGGAAAGAATGGAAAGTGGGAGAACAAAGAATGCAATCAGAAACTGGGATACATATGCAAGAAAGGCAGCATTACATCCAGCACATTTGTAATGCCCTCTGAAAGTGACAGTCCAATCAGCTGCCCACCATCATGGCTGCCTTATGCTGGTAATTGTTACACCGTGAAGAAAGAGAACAAAATCTGGAAGGAAGCGTTGTCTTCATGCAGAAAAGAGGAAGGAGATCTGGCGAGTTTCCACAATGTTGAAGAATTAAGTTTCATCTCCTCTCAGTTTGAATTTGAGCAAACAACAAAGGTTTGGATTGGACTGAATGATCAAAAAAGTCACATGTACTTTGAATGGAGCGACGGAACTCCGGTGTCATATACCGTGTGGCTAAGGGGAGAACCATCTCACCGTGACAATAAGCAGGAAGACTGCGTTGCATTTGACCCCAAGAGTGGTCATTGGTCAGATGACATGTGTGAAATGAAATTTCAGTATATCTGTAAAAGAAAACCGTTGCCTTTTGAACCTGGACAAGTGGATATCATTGATAAAGGATGTAAAAAGGGTTGGAAAAGACATGGCTATTATTGTTATCTTATAAGTGATACATCAGAATCATTTACAGAAGCTAATCAAACCTGCATTGGCCATGGAGCCTACCTTGTAACCGTTGAAGACAGGTTTGAACAAGCTTATCTCACAAGTCTAATAGGGCTGAGGCCTGAAAAGCAATTTTGGACGGGACTTACAGACTCAGACGAGAGAGGCGTCTATAAGTGGACTAATGGAGAAAGGGTTTTATTTACTCACTGGAATTCTGAAATGCCTGGAAGAAGACGAGGCTGTGTTGTCATGAGAACTGGAAACAAAGGGGGATTATGGGATGTTATAACCTGTGAAGAGAAAGCAAAATTTGTCTGCAAACAGTGGGCAGAAGGAGTAACGCCTCCTCCAATTCCGACAACGACGCCAGAGCCCAAGTGCCCAACTGATTGGAAGACATCCCCTGAAATTGGTTCATGTTATAAACATTTTTCTAGAGGAGAAGAAGAAAAGAGGACATGGTTTGAATCCAGAAGTTTTTGCAAAGCAATTGGTGGTGACTTAGTCAGCATCAACAGCAAAGAAGAAGAAACCATACTTTCACAATTGCTGGTGAATTACAGGTATTATAACCAGATTTTCTGGATAGGACTCCAAACATCAGATCCAGAAGAAGGCTTCGAATGGGTAGATGGCTCAGCCTTATCTTATGAAAACTGGGCGTATGGGGAACCCAACAATCACCAAGGCATCGAGTTATGTGGAGAATTGCACGTTAGTTATCGTCTTTCATGGAACGACAGGCATTGTGAATCCTCTGCAGACTGGATTTGTGAGCTCAAAAAAGGTGCACCTTTACAACCAGAACCAACAAAGTCTTCGGTTCCAGAGTATGAATTGACAAGTGATGGCTGGATTGCAAATAAAGACAACCAGTATTTTATTAGTACGGAGATTGTGGCCATGGATAAAGCAAGGGAATTTTGCAAGAAGAATTTTGGTGATCTTGTTGTCATCAATGATGATACGGAAAGAAAATTTCTTTGGAGATATATACTTAAAAATGGAAAGGAAAGTGCATATTTCATTGGATTAACTTTAGGACTGGACAGAGAATTTAGGTGGATGGATGGGTCTGTTATGAACTATGTAGCATGGGCAAGCTATGAACCCAACTTTGCAAATAATGATGAGAACTGTGTTGTAATGTACAAGAATATGGGCTTTTGGAATGACATAAACTGTGGCTATCCCAATCCATATATTTGTGAAAGGAAAAACAGTTCTATTAATGCAACATTTGCCCCAACTCCAGCTTCCCCACAAGGAGGATGCCCTTCAGACTGGATTACATTTGGGAAAAGGTGCTACAAAATATTTGGCAATGGAAAGGGTGAAGCGACAGACTGGGACTCGGCGCGCACAGCATGCATGAGATTTAATGGCAACCTTGCCACAGTGGAAAATGAATTAGTACAGGCTTTTCTCACCTACAATTTAAAAGATCTAAACATCGATGTCTGGATTGGAATGAATGATAAAAATGAAGAGCACCGGTTTCTCTGGACTGATCAAAGAGGCGTCTATTATACGAACTGGGCCAAGGGTCACCCAACAGGGAGTCGATATTACTCAGCTGATGATGATACTGATTGTGTTTCTATAAAGCGTGGCTCTACTTTGGATGCAGGATCATGGTTTGAGGAAGAGTGTTCCCTCAGCAGAGGATACATCTGTCAAACAGACAAAAACCCAGCTTTGCCTGCTTCTCCAACTATAGCACCTTCAGTTAGATTTTTCAAGTTTGGTAATGAAACCTTTAAAATCGTTAATTCCAAAATGTCATGGGATGAAGCGTGGCGTAAGTGTAAATCAGAAGATTCCGAACTTGTCAGCATTACAGATGAATACACCAATTCCTTCTTAAGGGTTTATACGTCTAAATACCGTGAACCTTTTTGGATTGGCCTTAACAGCAACAAGACTGGTAACCAATACAAATGGACTGATAACTGGAAACTTCGATATACCAAATGGGCTGCAGAAGAACCTAAGAAGACCACTGCATGTGTATATATGGATATAGATGGGCAGTGGAAGACATCATCATGCACTGAAAATTATTTCTCAATCTGCAAGCAGAGTGATGCAATTGCTCCCACTGATCCACCTCAAAAGCCTGGAAAGTGTCCTCCAGATTCAGATGACAGGTCATGGATCCCCTTCCGAGGTCACTGCTATTTAATTCAAGTATCTTACACCAAANACTGGTATCAGGCTTCTTTGGAATGTCTTCGGTTTGGTGGTTCTTTAGCATCCTTTGACGATTCATTGGAATCAAACTTTGTATGGCATCAAATTGAGAGACTGGAGGATAGAGTCAAGTCATTTTGGATTGGAATGTACCAGAATGTGGAAAATAAGTGGCTCTGGCTGGACAATGCTCCTGTTGACTTTGTAAACTGGAACATTGGGGAGCCTTCCGATCACAATGATGAGCACTGTGTTGAAATGTATTCATCGCATGGAACCTGGAATAACCTTTACTGCTCTTCTTATAGAGGGTATATCTGTAAAATCCAAAAAATTCCTGAACCTACAGAAAAGACCCCAGAGAACCCAGATAAAATTAAAACAGATGCACCCTCGCAGGGAAAGATTGGCGGAATTATCATTTTTGTCCTACTTGTTGGTGCCGGCTCAACCTATGCTGTTTACTATGTCTGCAAAAGACAGAAGAACAAACCACCAGAGGACAATAGCTTTGACAATAACTTGTATTTTGATGGGGACCGCGTACCTGCAACACATGACACTAACATTCTTGTGGAAAACATTGAGCAAAATGAACATGCCATCTCTTAGTATCACTGAATAATGTGATTTTTGGTATGAAGGACAGTAAATCTTTGCTGCAGTTTACAGGATTAACAGATGAAAATGAAAATAAGTTCAGCAACTATGATAACATCAAGGTGTCTTTTCCACTTAGATAGTAACTGTGGTCAATTATGGAAGAAGAAATATTATGGGACATATACTTTGGAATTCCAAGCTGTGTATAATGTGTTCATGAGACTTTAAAAAAAAAAAAAAAAAAAATACTACTGCAATGAAATGAAATCCATTACGAATGATGTTTGCAAGTAAGGCGTCTCAGCCAATCACAGTGATTCATCTTTACCAAAAAACATGGGCAGGCCCAATTATCTACTTACTCATTTTCATGCTTTTGGCGTTTTTTAAAAACCACTAAAAAACTCATTTTCTCCAAAACCACTAAAAGTGATGTATTAAAACAGCCTTTTAAGCTTGACAGCTTTTAGATGACATATTTTTACTTTTAGATTTGTTACAGTTTTGATGCATAATAAAATTGTAAATACATCGTTTTTTTCCATGAAAAAAATCGAGTTTTAGAACAAAGAAAAGAATTATGTCAAAACATAGGAACGTTAGTAAATGCCCCCCTAGTCAACTGGTGAGATTATCCAGCATTCAACAGTTTCTCTATGAAGCAATATACTGCTTTAACATCAGATTTCACAGGAGGAAATTAGGAGAAAGACAGATAAATCCCTGGGTTCAATGCATTTTGTTCCTTACCAATAAATGAATCACCTAAACTAACAGTGTGCCCTGCAGCTCTACCTTGTAGGAGCACATAAGGGTAACCAAAAGCATTTAGTCAATACCATTCATAGACAATAATCTCAGCCAATATATTTATGTTCCTATTATCTTAGGTGGCAATTCATTATGTATTTATTCTTTATGGAAAATTCAGACATCTTGGTGCTATGATGAAGTTAGAAATTCCATAAGTCACAGAAAGCCAATCAATTTGCTACCGATTGATTCCATCTCTAGACTAATATGAGCAAATAAATGAATGACATTTAATAGGGTTCTCTACTTTATTCACTAGCGGCAATACCTTTCAATGAGTATGGAGGAATGGTCAAAAGGCTCACACACTTTAGATTAAGTGGTATATACAGTTCCATAAGGCATACAGAACACTGTTTTTCAAAAACCACACACAGAAGACATTTTGTGAGCTTTCACCCCAAATTAGAGGGAAAATATGGATGGTCCTTGGGGGTTTGGAAACCAACAGTTTAGAATGAGTACATTCCCCTTCCAGGTTTTTGACACAGAAGCTATAACCGAGGCCTCAAATGTAGTTATCCGAGCTGAGTGGCTTTATCTGATTATTCTATATTTCCATCTGTTGTCATATTTTTCTTTACAAACAAAGCAAGTCGCCTCCCAGCCCTCCCTCTCTCTGTATCATACATGTTAAGAGCAAAAGCCATTATCAGGTTATTCTTTCATTCAAATATGTATATATAATCTTTTCAGTGGCAGGTTGGTCTTTTGTCTGCTCTCCCAGGAATCAGACAGTTAAACAGAGGGACGTTTTTACCGTGTTCTCTCTAATCCGTTTTCATGATTATCTCTTATTGATGATGTCTTAAATAAAATGTTCTGTGTTCTTTTACATTTA	Refseq >NM_001093438\|Xenopus laevis mannose receptor, C type 1 (mrc1), mRNA GACGGGGCAGCTGTTAACTTGGGATCCTGATCTTTGGCCGCCTACTGATCCTGTCTTTCCTGGATGATGGCCAATGAACATGATAAGTTTAATCTCCTACAAGAAGAGAGCAATTCTGTAGAAACAGGAAATACTACAAGAAGTAATGTTCCCAGAATGTCCCAGTTGGTCCCAACATCCACCCTGCGCCTCCTTTGTGGACTCTCCTCCTTGTGTGTTGTTCTCCTCATCCTCAATATTATTGTCACCTTCACAAAGTCCAATTCAGAGTGCCCAAATGGAGCTAATACAGAAATGGCCTCTCTTCCTGTTTGCCCTCCTTTTCCCTGCCCTGAGAAATGGTTTGAGTTCACTGGACACTGTTACTATATCACCAATACGCTTAAATCCTGGGATGGTGCAAAAACAACTTGTGAGAAGATGAACTCCCATTTGATTATGATCAACAGTTTAGAAGAACAAGAATTTGCTGTTGAATTTGCCGTTCAAAAAACGACATGGATCGGACTTTCTGATGCTGATGGAGAATGGAAGTGGGTGGACAAGACCCCATTAGACTGGAACCAAACATATTGGAGAGAGGGGCAACCAGACGACTGGACTGGCCATGGGAAAGGAGGAGGAGAAGACTGCGCCCAAATTGCTTATGACCAAAAGTGGAATGATGAGCAATGCAACAAACCATATCAATTCATTTGTGAGAAGGAGCAGAGAAACTGGAGAAAGTAACACAGAAATGGAAGTCCCTAGTCACTTCTCTAACCCAAGATGTTTCACTGAGAATGCAAACTCCAAATATAGCCAACTACTACCTTAAAGAGGCCCTACCTCTGGGAGGGGATTAGGAGTTTTTGGGGCCAGTCTGTGATATTGGCTGAGCCGCAAATATATTTATATATTAAAGCAGGGACAAAAAGCAAATGGACAATAAATATAAAATTGTCGCTTTTTGTCAGTCACTGGTCTCCAGAAAACTGCAGAAGTTCCTGACCACTTGGTACTACTTCTCATATTAATCTCTATGGCAGCTTCTGTAGGTGTTGGAGGGTATGTCCCTGGCCACTAGTAGCTAAGATACAGAGTATCCTTAAATTTAAAATTTTCTTGAGTCTTTTTTCCTAAAACACGAAACACAGTCACAATGTCAAAGTTGAGTTTTCACACAGTGGCACTACACATCAAATAACAACAACATGGAGAAATAGATTGCAATTAATACACAAGGATGTAATGTTTTTACAATGTTCCAAAACTTCTAAATGAAGATCTCATGAGAGACTTCACATCCATCCTACCAAGGCCCAAGAAGAGGTTCTGACTGAGGTCCATTTTGCTGCCCTACAGATAGTTTCCACTGCTGTTCAGGGTGTTCACGCTACTCTTGTAGAAAGAGCTTACAATCCAACTGATATCTGAAGTCCCAACTGCTCTTAAGCATTTTCATTAGATAATGATGATCCACCTTTAATGGTGTTTTTTTCTCCTTATCGATAACCCACTTTCTCTGTGTCTCCATTTAAAACTTTTTTACCTCAATATAAGCATCGAATAAAAGCCTGTTCCCCATTCTGAAAAAAAAAAAAAAAA
Protein		NCBI Protein >XP_002939048\|PREDICTED: macrophage mannose receptor 1-like [Xenopus (Silurana) tropicalis] MSALPILILLSIVQPSLQLDSSIFSIYNEEHKVCLQAQISGAIVTAPCKDNNDLQKFRWISLHQLVNVGVKQCLGATAKKDMAVVTTYSCDGTSELQKWECKNDTLFGIQGDTLHLNYGNVQHKVILYKGTGLWSRWKVYGTTDDLCTKAYEDVYTLLGNANGQPCVFPFKFQTKWHADCTLEGRSDGRRWCSTTSDYNKDKLYGFCPSTSISDTWWTTDSVTGVHYQINNQAALTWFQARKSCLQQESELLSITEIHEQTFLTGLSNTMTTSLWTGLNSLNFNAGWQWSGGSPFRYLNWVPGNPSSEPGINCVTLNTGKNGKWENKECNQKLGYICKKGSITSSTFVMPSESDSPISCPPSWLPYAGNCYTVKKENKIWKEALSSCRKEEGDLASFHNVEELSFISSQFEFEQTTKVWIGLNDQKSHMYFEWSDGTPVSYTVWLRGEPSHRDNKQEDCVAFDPKSGHWSDDMCEMKFQYICKRKPLPFEPGQVDIIDKGCKKGWKRHGYYCYLISDTSESFTEANQTCIGHGAYLVTVEDRFEQAYLTSLIGLRPEKQFWTGLTDSDERGVYKWTNGERVLFTHWNSEMPGRRRGCVVMRTGNKGGLWDVITCEEKAKFVCKQWAEGVTPPPIPTTTPEPKCPTDWKTSPEIGSCYKHFSRGEEEKRTWFESRSFCKAIGGDLVSINSKEEETILSQLLVNYRYYNQIFWIGLQTSDPEEGFEWVDGSALSYENWAYGEPNNHQGIELCGELHVSYRLSWNDRHCESSADWICELKKGAPLQPEPTKSSVPEYELTSDGWIANKDNQYFISTEIVAMDKAREFCKKNFGDLVVINDDTERKFLWRYILKNGKESAYFIGLTLGLDREFRWMDGSVMNYVAWASYEPNFANNDENCVVMYKNMGFWNDINCGYPNPYICERKNSSINATFAPTPASPQGGCPSDWITFGKRCYKIFGNGKGEATDWDSARTACMRFNGNLATVENELVQAFLTYNLKDLNIDVWIGMNDKNEEHRFLWTDQRGVYYTNWAKGHPTGSRYYSADDDTDCVSIKRGSTLDAGSWFEEECSLSRGYICQTDKNPALPASPTIAPSVRFFKFGNETFKIVNSKMSWDEAWRKCKSEDSELVSITDEYTNSFLRVYTSKYREPFWIGLNSNKTGNQYKWTDNWKLRYTKWAAEEPKKTTACVYMDIDGQWKTSSCTENYFSICKQSDAIAPTDPPQKPGKCPPDSDDRSWIPFRGHCYLIQVSYTKXWYQASLECLRFGGSLASFDDSLESNFVWHQIERLEDRVKSFWIGMYQNVENKWLWLDNAPVDFVNWNIGEPSDHNDEHCVEMYSSHGTWNNLYCSSYRGYICKIQKIPEPTEKTPENPDKIKTDAPSQGKIGGIIIFVLLVGAGSTYAVYYVCKRQKNKPPEDNSFDNNLYFDGDRVPATHDTNILVENIEQNEHAIS	Refseq >NP_001086907\|mannose receptor, C type 1 [Xenopus laevis] MASLPVCPPFPCPEKWFEFTGHCYYITNTLKSWDGAKTTCEKMNSHLIMINSLEEQEFAVEFAVQKTTWIGLSDADGEWKWVDKTPLDWNQTYWREGQPDDWTGHGKGGGEDCAQIAYDQKWNDEQCNKPYQFICEKEQRNWRK

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		[+] Str.28111	Xl.3259 [+] Xl.71312
Unigene EST Profile			EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	MRC1
mouse		MGI	Mrc1	All(2) Targeted, knock Out(1) Targeted, other(1)
zebrafish		ZFIN	mrc1a mrc1b

Publications
First:		Regulation of early expression of Dlx3, a Xenopus anti-neural factor, by beta-catenin signaling. [Mech Dev 2000]
Most recent:		A photoactivatable small-molecule inhibitor for light-controlled spatiotemporal regulation of Rho kinase in live embryos. [Development 2012]
		View All Papers 1 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:		sugar binding
Biological:
Cellular Component:
EC:
KOG:		[TV] C-type lectin

Reagents		tropicalis	laevis
Clones			open biosystems
			geneservice/RZPD imagenes
Affymetrix 1.0		Str.28111.1.A1_at [+] StrEns.7052.1.S1_a_at StrEns.7052.1.S1_s_at
Affymetrix 2.0			Xl2.10648.1.S1_at [+] Xl2.51478.1.S1_at Xl2.14710.1.A1_s_at Xl2.14710.1.A1_at Xl2.3259.1.A1_at

Symbol legend[+]