dnaja3 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (2)

Nucleotides (1956)

Interactants (7)

XB-GENEPAGE-5718162

[provisional- machine annotated only] Gene Symbol: dnaja3 [Predicted: Source is Human Entrez Gene] Gene Name: DnaJ (Hsp40) homolog, subfamily A, member 3 [Predicted: Source is Human Entrez Gene] Synonyms: tid1 Add Xenopus synonyms Gene Function: Interactants: dnaja2(1) , dnajb6(1) , hsp70(1) , id2(1) , id3(1) , smad7(1) , smad9(1) View All

XB-GENE-5718163

XB-GENE-6254987

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001126905\|Xenopus (Silurana) tropicalis DnaJ (Hsp40) homolog, subfamily A, member 3 (dnaja3), mRNA GATGGCGCACTTCCGGTGTCCCGATGACTTTCCTCCCCGTGTTTCTAATAGGCATGTGCAGTGTGCCGGCTTGTCCTGGGAAGATGGCGGCCCGCTGTTCGTCGCGTTGGTTCTCGGTCGCAGTATCAGGCGCTAGGGGCCACATCCTTCCCGGTGTGCATCGGTGGCCCAGGGCTGAGGCGGCTTTGCTGCTGGCATTGCGGGCGGGCCGCGGATCCCTAGCAGGCCCCTGTGAGCGCCTGTCCCAGTTCCATACCAGCTCTTCCTCATACAACAAGACAGATTTTTACCAGGTACTGGGGGTGCCAAGGAACGCAAGCCAGAAAGAAATAAAGAAGGCCTATTACCAGCTGGCCAAAAAGTACCATCCAGACACTAACAAGGAGGATCCGCAAGCCAAAGAAAAGTTCTCTCAGCTGGCAGAAGCATACGAGGTTTTGAGCGACGAGGTTAAACGCAAGCAGTATGACACTTATGGAACTGCAGACTTTGCTGCTGGGGCAGCAGGGGGAGGAGGACAACAATACTGGAGAGGAGGTCCTACTGTTGATCCAGAGGAACTGTTCCGAAAGATCTTTGGGGAGTTTTCTGGCTCCCCATTCGGAGACTTGGGTAGCATGTTTGAGCAGCCGCAAGAGTACATCATGGATCTCACGTTCATTCAGGCGGCTAAGGGAGTGAATAAGCAGATCTCTGTAAACATTACGGACACGTGCCAGAGGTGTGATGGGAAAGGAAATGAGCCCGGCACCAAACTGCAGCACTGCCATTACTGTAATGGAACTGGCATGGAAACTATCAACACTGGCCCCTTTGTGATGCGCTCGACGTGCCGCCGCTGCGGTGGGAAGGGAGCTACGATGACCAACCCTTGCCTGTCATGCAGGGGCTCTGGCCAAACAAAGCAGAAGAAAACTGTTACAGTGCCTGTGCCTGCTGGTGTGGAAGACGGGCAGACAGTTCGGATGCCGGTTGGAAAGAAAGAGATTTTTATTACATTTCGGGTGCAGAAAAGTCCAATCTTTAGAAGGGATGGGGCAGATATTCACTCGGACCTGTATATTTCCATTGCTCAAGCTGTTCTGGGGGGTTCTGCTCGTGCACAAGGACTTTATGATCCCATCAATGTCCCTGTCCCTGCCGGCACACAAGCAGACCAGAGGATTCGGATCAGTGGGAAAGGTATCCCTCGTATGAACAGTTATGGCTTTGGAGATCACTATATCCACATCAAGGTCAGAGTACCCAGGCATTTGACTGACAGGCAACGGATGCTAATGCTTAGCTTTGCAGAAGATGAGACAGATGTAGAAGGAACAGTAAATGGCATCACTAACACAACAACAGGCAGAAACCAGCACAGATCTGCAACTGGGGAGGAGAGCCCTGAGACTAAGGAGGCAGGGGAGAACAAGGAGGGATTCCTAAGCAAATTAAAGAAAATGTTTAGCTCCTGACACCTCAGTGAGGAAAACGATCAACAGGAAACTAGTTATTGCAGAGCTTACCTGTCTGTGAAAATGGAGCAAATCTATGGACTCTTTTCACCACTATGCCATGAAGCACCATACAGAATAAGCATAACCATTTGCCAGGCAGCCAGAAGAAGCCATATTGAGTTGCACCTTGCTCGGGCACAAAATAACCAAGGACTGACGTTAAGGTTGAATGAAGGAGGCATCTGCCATACAGACCATCTATTCCATTCTTGTTCTTGTAACAATCTAAAAAAAAAAAAAAA	Refseq >NM_001097895\|Xenopus laevis DnaJ (Hsp40) homolog, subfamily A, member 3 (dnaja3), mRNA GTGTCTAATAGGCATGTGCAGTGTGCCGGCTTGTCCTGGGGAAGATGGCGGCTCGCTGTTCGTCGCGTTGGTTCTTGGTCGCAGTGTCTGGAGCTCGGGGCCACATCCTTCCCGGTGTCCATCGGGGGCCCAGGGCTGAGGCAGCTTTGGTATTGGCCTTGCGGGCGGCCCGTGGCCCAGCTGCAGTCCTGTGTGAGCGCCTTTCCCAGTTCCATACCACCTCTTCCTCATACAACAAGACAGACTTTTACCAGGTACTGGGGGTTCCGAGGAACGCAAGCCAGAAAGAAATAAAGAAGGCCTATTACCAGTTGGCCAAAAAGTACCATCCAGACACTAATAAGGAGGATCCGCAGGCTAAAGAAAAGTTCTCTCAGCTGGCAGAAGCATACGAGGTCCTGAGTGACGAGGTCAAACGCAAGCAGTATGACACCTATGGAACTGCAGACTTTGCTGCCGGGGCAGGAGGCGGAGGAGGTCAGCAACGCTGGAGAGGAGGTCCTACTGTCGATCCAGAGGAACTCTTCCGGAAGATCTTTGGGGAATTCTCTGGCTCCCCGTTTGGAGATTTAGGTAGCATGTTTGAGCAGCCACAAGAGTACATCATGGACCTCACGTTCATTCAGGCGGCTAAGGGAGTGAACAAGGAGATCTCTGTAAACATTACAGACACGTGCCACAGGTGTGATGGGAAAGGAAATGAGCCTGGCACCAAACTGCAGCACTGCCATTACTGTAATGGAACTGGGATGGAAACTATCAACACTGGCCCCTTTGTGATGCGCTCGACTTGCCGGCGCTGTGGTGGGAAGGGTTCTACCATGACCAACCCTTGCCTGTCATGCAGGGGCTCTGGCCAAACAAAGCAGAAGAAAACTGTTACTGTGCCTGTACCTGCAGGTGTGGAAAATGGGCAGACGGTTCGGATGCCAGTGGGAAAGAAAGAGATTTTTATTACATTTCGGGTGCAGAAAAGTCCAGTCTTTAGAAGAGATGGGGCAGATATTCACTCGGACCTGTTTATTTCCGTTGCTCAAGCTGTTCTGGGGGGTTCTGCCCGTGCACAAGGACTATATGAACCCATCAATGTCCCTATCCCTGCCGGCACACAAGCAGACCAGAGGATTCGGATTGGTGGAAAAGGTATTGCTCGTATGAGCAGTTATGGCTTTGGAGATCATTATATCCACGTCAAGGTCAAAGTACCCAGGCATCTGACTGACAGGCAACGAATGCTAATGCTTAGCTTTGCAGAGGATGAGACAGATGTAGAAGGAACAGTAAATGGCATCACTAACACAACAACAGGCAGAAACCAGCCCAGCTCTGCAGCTGGGGAGGAGAGACCTGAGACTGAGCAGGCAGGGGAGAACAAGGAGGGATTCCTAAGCAAACTAAAGAGAATGTTTAGCTCCTGACACCTCTGTGAGGAAAGCGATCAACAGGAAACTAGTTATTGCAGAGCTTACCTGTCTGTGAAGAAGGAGCAAAGATATGGACTCTTTACCACTATCCCATGAAGCTCGGCACCCTACAAAATAAGAATAAATATTTCCCAGGCAGCCAGAAGAAACCACAATCGGTTGCGCCTCGCTCAGGCACAGCAGGTTATCTGGGGACTGAAGGTTGAATGAAGGAGGCACCTGCCACGCAGACCACCTATTCCATTCTTGTTCTTGTAACAATCTTAACAAAGTCTTGTAGATTCTTATGTTGTCAAGTTCTCTCTCCTCTGTTCTTATTGGATATAAATGATACCCCATTTGGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001120377\|DnaJ (Hsp40) homolog, subfamily A, member 3 [Xenopus (Silurana) tropicalis] MAARCSSRWFSVAVSGARGHILPGVHRWPRAEAALLLALRAGRGSLAGPCERLSQFHTSSSSYNKTDFYQVLGVPRNASQKEIKKAYYQLAKKYHPDTNKEDPQAKEKFSQLAEAYEVLSDEVKRKQYDTYGTADFAAGAAGGGGQQYWRGGPTVDPEELFRKIFGEFSGSPFGDLGSMFEQPQEYIMDLTFIQAAKGVNKQISVNITDTCQRCDGKGNEPGTKLQHCHYCNGTGMETINTGPFVMRSTCRRCGGKGATMTNPCLSCRGSGQTKQKKTVTVPVPAGVEDGQTVRMPVGKKEIFITFRVQKSPIFRRDGADIHSDLYISIAQAVLGGSARAQGLYDPINVPVPAGTQADQRIRISGKGIPRMNSYGFGDHYIHIKVRVPRHLTDRQRMLMLSFAEDETDVEGTVNGITNTTTGRNQHRSATGEESPETKEAGENKEGFLSKLKKMFSS	Refseq >NP_001091364\|DnaJ (Hsp40) homolog, subfamily A, member 3 [Xenopus laevis] MAARCSSRWFLVAVSGARGHILPGVHRGPRAEAALVLALRAARGPAAVLCERLSQFHTTSSSYNKTDFYQVLGVPRNASQKEIKKAYYQLAKKYHPDTNKEDPQAKEKFSQLAEAYEVLSDEVKRKQYDTYGTADFAAGAGGGGGQQRWRGGPTVDPEELFRKIFGEFSGSPFGDLGSMFEQPQEYIMDLTFIQAAKGVNKEISVNITDTCHRCDGKGNEPGTKLQHCHYCNGTGMETINTGPFVMRSTCRRCGGKGSTMTNPCLSCRGSGQTKQKKTVTVPVPAGVENGQTVRMPVGKKEIFITFRVQKSPVFRRDGADIHSDLFISVAQAVLGGSARAQGLYEPINVPIPAGTQADQRIRIGGKGIARMSSYGFGDHYIHVKVKVPRHLTDRQRMLMLSFAEDETDVEGTVNGITNTTTGRNQPSSAAGEERPETEQAGENKEGFLSKLKRMFSS

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.64882 [+] Str.5403	[+] Xl.46743
Unigene EST Profile		EST Profile
GEO data			GEO
Images		0 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	DNAJA3
mouse		MGI	Dnaja3	All(6) Targeted, knock Out(2) Targeted, other(4)
zebrafish		ZFIN ZFIN	dnaja3a dnaja3b	1 Lines(s)

Publications
First:		Identification in a fish species of two Id (inhibitor of DNA binding/differentiation)-related helix-loop-helix factors expressed in the slow oxidative muscle fibers. [Eur J Biochem 1997]
Most recent:		Tid1 is a Smad-binding protein that can modulate Smad7 activity in developing embryos. [Biochem J 2006]
		View All Papers

Functional Ontologies
GO: Molecular:
Biological:
Cellular Component:
EC:
KOG:

Reagents		tropicalis	laevis
Clones		open biosystems
		geneservice/RZPD imagenes
Affymetrix 1.0		Str.31930.4.S1_at [+] Str.13941.1.A1_at Str.23939.1.A1_at Str.5403.1.A1_at	Xl.15457.1.S1_at [+] Xl.22356.1.A1_s_at Xl.22356.1.A1_at
Affymetrix 2.0			Xl2.15457.1.S1_a_at [+] Xl2.46743.2.A1_a_at

Symbol legend[+]