Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (0) GO Terms (4) Nucleotides (48) Proteins (14) Interactants (283) Wiki
XB-GENEPAGE-5796592
Gene Symbol:
trim54

Gene Name:
tripartite motif containing 54

Synonyms:
murf , rnf30 , murf-3 ( Add synonyms , Nomenclature history )

Gene Function:
Predicted E3 ubiquitin ligase

Protein Function :
May bind and stabilize microtubules during myotubes formation.


Interactants:
Loading ...

Diseases: 


External Links:
 
Xenbase Gene ID XB-GENE-5796593 XB-GENE-17331523 XB-GENE-5796597
Gene Symbol trim54 trim54.L trim54.S
Chromosome scaffold_6283 chr5L chr5S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 4.1 Version 9.2 Version 9.2
CDS Gene model Gene model
Entrez Gene 108716295
432166
mRNA NCBI Nucleotide RefSeq
Protein NCBI Protein NCBI Protein RefSeq  More..
Genomic
X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING In situ: Single cell: RNA-Seq:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine trim54 trim54.L trim54.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards TRIM54 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Trim54 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Trim54 Ensembl
zebrafish
ZFIN, AGR trim54 ZFIN Ensembl
chicken
GEISHA FSD1 Ensembl
fruit fly
worm
Publications
First
Most Recent
All View All Papers
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 0 term 0 term 4 terms
PANTHER trim54
KEGG Pathways K10653
KOG [O] Predicted E3 ubiquitin ligase (alt_id KOG:2177)
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks
ORFs trim54.S ORF1
Clones Source BioScience Horizon Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
Xenbase: The Xenopus Model Organism Knowledgebase.
Version: 4.15.0
Major funding for Xenbase is provided by grant P41 HD064556