Gene Symbol: zfp36l2.1 [provisional] Gene Name: zinc finger protein 36, C3H type-like 2, gene 1 [provisional] Synonyms: zfp36l1, brf2, erf2, erf-2, tis11d, rnf162c, c3h-4, xC3H-4, zfp36l4 Add Xenopus synonyms Gene Function: CCCH-type Zn-finger protein Interactants: zfp36l1(3) , zfp36(2) , Somite Ab1(1) , aplnr(1) , bmp2(1) , ccr4(1) , chrd(1) View All

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001016822|Xenopus (Silurana) tropicalis zinc finger protein 36, C3H type-like 2, gene 1 (zfp36l2.1), mRNA ATCTGAATGGGGAATCACAGCTGATGATGGAGATGTCAAATGAGAGCCTGGATCTCTTCTCCTCTTTTTTTCCCCCACTCTCTCCTCCTTCTGATCCAGAGATTCCGCTCCTCCCTTCTTTCTCAGCACCTCCAAAGCACTCGAGCCTCTCATCCCTTCGCTACAAGACAGAACTGTGCACCAGATATGCAGAGAGTGGATTCTGTGCCTACAGGAATCGCTGCCAGTTTGCCCATGGTCTAAGTGAGCTCAGGCCTCCAGTTCAGCACCCTAAATACAAGACAGAACTGTGTCGCTCCTTCCACGTGCTTGGTACCTGTAACTATGGATTGCGTTGTTTGTTCATTCACAGCCCACAGGAGAGAAGGGAGTCTCCAGTCTCCCCTGATGCCCCTCGTCTTCCAACACGCAAGTATGCTGGCCCTTATAGGGAGCGGTGCCGCCTCTGGCGTTCTCCTGGTGGCTGTCCTTATGGAGCTCGGTGCCACTTTCAGCACCCAAAAAGTAGTCGGGAGGTTTGCCGTCACTTTGCTGCTCTTGGAGACTGTCCATATGGAGCCCGTTGCCACTTCTCTCATAGCCCTCCCCTTGACAGGTGGGGTTCAGGAACAAAGAACAGCAGTGGGTCCCTCTCACCTTCAGATCCAGACCCCGATAGTGACCCTGGCACTCCTGTCCTCTCAGAATCTCCTGCTAATAATGCCTTCAGTTTTGCAAGCCTTCTCCTACCTCTTGCCCTGCGTCTGCAGATTTTGGGAGATGAGGAAGACTTACCTACTGCTACTGACCCACTGCCTGGAGATGAAGAAATTGCCCAGGGTCTACTTTCTGTTCTCGACTAAAATTTACCTTTTTTAATTTCATGACACTGGCACAATGACCCCCTCCTCTGGTGTAGGATTAACATGCATAGCATGTTTCCCCAGTTTTTCACTTCTATGCCAGCAGTGAGAAGCCAGTTTGTTTTATTTAGATCCTTCATTTTTCTCTTGTACATAAGCGTGTTAATTTATTTACCCACCTGGCTGCAGTTATGTATGTATTTTAATATTGGTAAGTGGCTGGTGGTTCTCAGACAAGATGTTTTTATGTCACTAATTAAAGTGTGATTTTTATTAAATCTGTTTTAAACATAAAAAAAAAAAAAAAAAA	Refseq >NM_001088419|Xenopus laevis CCCH zinc finger protein C3H-4 (c3h-4), mRNA CGGCACGAGTGGATCTGAATGGGGAGTCAAAGCTGGCAATGGAGATATCAAATGACAGTCTGGATCTCTTCTCTTCATTCTTTCCCCAACTCTCTCCTCCTGCTGATCCAGAGACTCCGCTCCTCCCTTCTTTCTCGGCACCTCCAAAGCACTTGAGCCTCTCATCCCTGCGGTACAAGACAGAACTGTGCAGCAGATATGCAGAGAGTGGATTCTGTGCTTACAGGAATCGCTGCCAGTTTGCCCATGGTCTAAGTGAGCTCAGGCCTCCAGTTCAGCACCCCAAATACAAGACAGAACTGTGTCGCTCCTTCCATGTCCTTGGCACCTGTAACTATGGCTTGCGTTGCCTGTTCATTCACAGTCCCCAGGAGAGAAGAGAGCCTCCGGTCTTACCTGATAACCTCAGTCTTCCACCACGCAGGTATGGTGGTCCTTATAGGGAGAGATGCCGCCTCTGGAGTGCCCCTGGTGGCTGTCCTTATGGAGCTCGGTGCCACTTTCAGCACCCAAAAAGTGCCAGGGAGACTTGCCGTCACTTTGCTGCTCTTGGAGACTGTCCATATGGAGCTTGTTGTCACTTCTCTCATAGCCCTCCCCTTGACAGGTGGGGTTCAGGAACAAAGAATAGCAGTGGGTCCCTCTCCCCTTCAGATCCAGACAGTGACCCTGACACCCCTGTCCTCTCAGAATCTCCTGCTAACAATGCCTTCAGTTTTTCAAGCCTCCTCCTACCTCTTGCCCTGCGTCTGCAGATTCTTGGAGATGATGACTTGCCTACTGCTTCTGACCCACTGCCTGGAGATGATACTGACCTACTCCCTGGAGATGAAGAAATTGCTCAGGGTCTACTGTCTGTCCTCGGCTAACTTTATACTTTATTATAATGACTCTGGCATAGAATTAACATGCATAGCATGTTGCCCCAGTTTTTTTTTTTCTTCTTTCTTTTATCTTTTATGCCAGCAGTTGAGAAGCCAGTCTTATTTACAACCTTCTCTTGTACATACATTTATTAATTTATTGCCCACCTGACTGCAGTTATGCTATTTTAATATTGGTTAAGTGGCTGGTGGTTTTTAAGACAAGATGGTTTTTATGTCACTAATTAATTAAAAGTGTGATTTTATTAAATCTGTTTTTAAGCGTAAAAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001016822|zinc finger protein 36, C3H type-like 2, gene 1 [Xenopus (Silurana) tropicalis] MEMSNESLDLFSSFFPPLSPPSDPEIPLLPSFSAPPKHSSLSSLRYKTELCTRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTELCRSFHVLGTCNYGLRCLFIHSPQERRESPVSPDAPRLPTRKYAGPYRERCRLWRSPGGCPYGARCHFQHPKSSREVCRHFAALGDCPYGARCHFSHSPPLDRWGSGTKNSSGSLSPSDPDPDSDPGTPVLSESPANNAFSFASLLLPLALRLQILGDEEDLPTATDPLPGDEEIAQGLLSVLD	Refseq >NP_001081888|CCCH zinc finger protein C3H-4 [Xenopus laevis] MEISNDSLDLFSSFFPQLSPPADPETPLLPSFSAPPKHLSLSSLRYKTELCSRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTELCRSFHVLGTCNYGLRCLFIHSPQERREPPVLPDNLSLPPRRYGGPYRERCRLWSAPGGCPYGARCHFQHPKSARETCRHFAALGDCPYGACCHFSHSPPLDRWGSGTKNSSGSLSPSDPDSDPDTPVLSESPANNAFSFSSLLLPLALRLQILGDDDLPTASDPLPGDDTDLLPGDEEIAQGLLSVLG

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase
Synteny		Metazome

Expression		tropicalis	laevis
UniGene		Str.21536 [+] Str.39450	Xl.54892
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		1 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	ZFP36L2
mouse		MGI	Zfp36l2	All(7) Targeted, knock Out(4) Targeted, other(3)
zebrafish		ZFIN	zfp36l1a

Publications
First:		Identification of four CCCH zinc finger proteins in Xenopus, including a novel vertebrate protein with four zinc fingers and severely restricted expression. [Gene 1999]
Most recent:		Comparative Functional Analysis of ZFP36 Genes during Xenopus Development. [PLoS One 2013]
		View All Papers 1 paper(s) referencing morpholinos

Functional Ontologies
GO: Molecular:		nucleic acid binding
Biological:
Cellular Component:
EC:
KOG:		[R] CCCH-type Zn-finger protein (alt_id KOG:1677)

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.27898.1.S1_at [+] Str.39450.1.A1_at	Xl.2805.1.S1_a_at [+] Xl.2805.1.S1_at
Affymetrix 2.0			Xl2.54892.1.S1_at

Symbol legend[+]

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