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Summary Expression Gene Literature (1) GO Terms (9) Nucleotides (105) Proteins (20) Interactants (307) Wiki
XB-GENEPAGE-5872209
Gene Symbol: ctu1

Gene Name: cytosolic thiouridylase subunit 1

Synonyms: ncs6 , atpbd3 ( Add synonyms , Nomenclature history )

Gene Function: Uncharacterized conserved protein with similarity to predicted ATPase of the PP-loop superfamily

Protein Function :
Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an interme...[+]

Interactants: Loading ...
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Xenbase Gene ID XB-GENE-5872210 XB-GENE-5872246 XB-GENE-17344397
Gene Symbol ctu1 ctu1.L ctu1.S
Chromosome Chr01 chr1L
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene: 548460
Entrez Gene: 779274
mRNA RefSeq RefSeq
Protein RefSeq Swiss-Prot RefSeq TrEMBL Swiss-Prot
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine ctu1 ctu1.L ctu1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards CTU1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Ctu1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ctu1 ZFIN Ensembl
chicken
GEISHA CTU1 Ensembl
fruit fly
worm
WORMBASE
Publications
First Genome-wide identification of thyroid hormone receptor targets in the remodeling intestine during Xenopus tropicalis metamorphosis., Sci Rep 2017              
Most Recent
All View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 8 terms 7 terms 0 term
PANTHER ctu1
KEGG Pathways K14168 K14168
KOG [R] Uncharacterized conserved protein with similarity to predicted ATPase of the PP-loop superfamily
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
Dharmacon Dharmacon
ORF ctu1 ORF1 ctu1.L ORF1
Affymetrix 1.0 Str.20338.1.S1_at [+] Xl.15312.1.A1_at [+]
Affymetrix 2.0 Xl2.54081.1.S1_at [+]

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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Version: 4.12.1


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