Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (1) GO Terms (9) Nucleotides (112) Proteins (23) Interactants (310) Wiki
XB-GENEPAGE-5872209
Gene Symbol:
ctu1

Gene Name:
cytosolic thiouridylase subunit 1

Synonyms:
ncs6 , atpbd3 ( Add synonyms , Nomenclature history )

Gene Function:
Uncharacterized conserved protein with similarity to predicted ATPase of the PP-loop superfamily

Protein Function :
Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an interme...[+]



Interactants:
Loading ...

Diseases: 


External Links:
1/2
 
Xenbase Gene ID XB-GENE-5872210 XB-GENE-5872246 XB-GENE-17344397
Gene Symbol ctu1 ctu1.L ctu1.S
Chromosome Chr01 chr1L
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2
CDS Gene model Gene model
Entrez Gene 548460
779274
mRNA RefSeq RefSeq
Protein RefSeq Swiss-Prot RefSeq Swiss-Prot
Genomic
tropicalis laevis.L laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine ctu1 ctu1.L ctu1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards CTU1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Ctu1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Ctu1 Ensembl
zebrafish
ZFIN, AGR ctu1 ZFIN Ensembl
chicken
GEISHA CTU1 Ensembl
fruit fly
worm
Publications
First Genome-wide identification of thyroid hormone receptor targets in the remodeling intestine during Xenopus tropicalis metamorphosis., Sci Rep 2017              
Most Recent
All View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 8 terms 7 terms 0 term
PANTHER ctu1
KEGG Pathways K14168 K14168
KOG [R] Uncharacterized conserved protein with similarity to predicted ATPase of the PP-loop superfamily
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks ctu1
ORFs ctu1 ORF1 ctu1.L ORF1
Clones Horizon Source BioScience Horizon Source BioScience

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
Xenbase: The Xenopus Model Organism Knowledgebase.
Version: 4.14.0
Major funding for Xenbase is provided by grant P41 HD064556