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Summary Expression Gene Literature (3) GO Terms (10) Nucleotides (96) Proteins (36) Interactants (68) Wiki
XB-GENEPAGE-5953795
Gene Symbol:
pnkp

Gene Name:
polynucleotide kinase 3'-phosphatase

Synonyms:
( Add synonyms , Nomenclature history )

Gene Function:
Polynucleotide kinase 3' phosphatase

Protein Function :



Interactants:
Loading ...

Diseases: 


Disease Ontology:
Ohtahara syndrome [+]

OMIM:
MICROCEPHALY, SEIZURES, AND DEVELOPMENTAL DELAY; MCSZ [+]

External Links:
 
Xenbase Gene ID XB-GENE-5953796 XB-GENE-17337425 XB-GENE-5953819
Gene Symbol pnkp pnkp.L pnkp.S
Chromosome Chr07 chr7S
Molecules X. tropicalis X. laevis.L X. laevis.S
Genomic Sequence Version 9.1 Version 9.2
CDS Gene model Gene model
Entrez Gene 100145800
100137702
mRNA RefSeq RefSeq
Protein NCBI Protein RefSeq  More.. NCBI Protein RefSeq  More..
Genomic
X. tropicalis X. laevis.L X. laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics X. tropicalis X. laevis.L X. laevis.S
Embryonic Protein Expression Stage profile:
Data Mining X. tropicalis X. laevis.L X. laevis.S
XenMine pnkp pnkp.L pnkp.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards PNKP OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Pnkp MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Pnkp Ensembl
zebrafish
ZFIN, AGR pnkp ZFIN Ensembl
chicken
GEISHA PNKP Ensembl
fruit fly
worm
Publications
First Aprataxin, causative gene product for EAOH/AOA1, repairs DNA single-strand breaks with damaged 3''-phosphate and 3''-phosphoglycolate ends., Nucleic Acids Res 2007                    
Most Recent DNA ligase III acts as a DNA strand break sensor in the cellular orchestration of DNA strand break repair., Nucleic Acids Res 2015                        
All View All Papers
Functional Ontologies X. tropicalis X. laevis.L X. laevis.S
GO 10 terms 0 term 4 terms
PANTHER pnkp
KEGG Pathways K08073 K08073
KOG [L] Polynucleotide kinase 3' phosphatase
Reagents X. tropicalis X. laevis.L X. laevis.S
CRISPRscan Tracks pnkp
Clones Horizon Source BioScience Horizon Source BioScience
Plasmids Addgene Addgene

Symbol legend: Blast sequence    View sequence    Literature or expression images   Hover cursor for info   [+] Expand list
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