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Summary Expression Gene Literature (3) GO Terms (0) Nucleotides (55) Proteins (16) Interactants (174) Wiki
XB-GENEPAGE-6048227
Gene Symbol:
col9a1

Gene Name:
collagen, type IX, alpha 1

Synonyms:
edm6 ( Add synonyms , Nomenclature history )

Gene Function:
Collagens (type IV and type XIII), and related proteins

Protein Function :


InterPro :
Collagen

Interactants:
Loading ...

Diseases: 


Disease Ontology:
multiple epiphyseal dysplasia

OMIM:
EPIPHYSEAL DYSPLASIA, MULTIPLE, 6; EDM6 [+]

External Links:
 
Xenbase Gene ID XB-GENE-6048228 XB-GENE-6255670 XB-GENE-17342931
Gene Symbol col9a1 col9a1.L col9a1.S
Chromosome Chr05 chr5L
Molecules tropicalis laevis.L laevis.S
Genomic Sequence Version 9.1 Version 9.2
CDS Gene model Gene model
Entrez Gene 100145133
446631
mRNA NCBI Nucleotide RefSeq
Protein NCBI Protein RefSeq
Genomic
tropicalis laevis.L laevis.S
Genome Browser
(Click image to open in Genome Browser)
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Data Mining tropicalis laevis.L laevis.S
XenMine col9a1 col9a1.L col9a1.S
Orthology
Knowledgebases Entrez Gene Genetic Phenotypes Gene Expression
human
HGNC AGR, OMIM:Gene, GeneCards COL9A1 OMIM Ensembl, Allen Brain Atlas, Protein Atlas
mouse
MGI, AGR Col9a1 MGI, IMPC Ensembl, Allen Brain Atlas, Eurexpress, MGI
rat
RGD, AGR Col9a1 Ensembl
zebrafish
ZFIN, AGR ZFIN, AGR col9a1b col9a1a ZFIN Ensembl
chicken
GEISHA COL9A1 Ensembl
fruit fly
worm
Publications
First Gene expression changes at metamorphosis induced by thyroid hormone in Xenopus laevis tadpoles., Dev Biol 2006          
Most Recent Transcriptome profiling reveals male- and female-specific gene expression pattern and novel gene candidates for the control of sex determination and gonad development in Xenopus laevis., Dev Genes Evol 2019          
All View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 0 term 0 term 0 term
PANTHER col9a1
KEGG Pathways K08131
KOG [W] Collagens (type IV and type XIII), and related proteins
Reagents tropicalis laevis.L laevis.S
CRISPRscan Tracks col9a1
ORFs col9a1.L ORF1
Clones Horizon Source BioScience Horizon Source BioScience

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