Click here to close Hello! We notice that you are using Internet Explorer, which is not supported by Xenbase and may cause the site to display incorrectly. We suggest using a current version of Chrome, FireFox, or Safari.

Summary Expression Gene Literature (1) GO Terms (0) Nucleotides (131) Proteins (43) Interactants (6) Wiki
XB-GENEPAGE- 6451484

Gene Symbol: col4a1

Gene Name: collagen, type IV, alpha 1

Synonyms: arresten
Add Xenopus synonyms , Nomenclature history


Gene Function:

Protein Function:


Interactants: YYY

OMIM Disease Associations: ANGIOPATHY, HEREDITARY, WITH NEPHROPATHY, ANEURYSMS, AND MUS... [+]
 
Xenbase Gene ID XB-GENE-6451485 XB-GENE-6252694 XB-GENE-17340950
Gene Symbol col4a1 col4a1.L col4a1.S
Chromosome scaffold_2 chr2L chr2S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 7.2 JBrowse 7.2 GBrowse 6.0 GBrowse 9.1 JBrowse 9.1
Entrez Gene
Entrez Gene
mRNA NCBI Nucleotide NCBI Nucleotide
Protein NCBI Protein NCBI Protein
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v7.1 gene model
GBrowse
laevis genome v9.1 gene model
GBrowse
laevis genome v9.1 gene model
Links
Genomic Synteny Genomicus
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene [+] Xl.21561
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 0 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine col4a1 col4a1.L col4a1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards COL4A1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Col4a1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN col4a1 ZFIN Ensembl
chicken
GEISHA COL4A1 Ensembl
fruit fly
FLYBASE Col4a1 Ensembl
worm
WORMBASE
Publications
First: Foxc2 induces expression of MyoD and differentiation of the mouse myoblast cell line C2C12. [Biochem Biophys Res Commun 2007]
Most recent:
View All Papers
Functional Ontologies tropicalis laevis.L laevis.S
GO 0 term 0 term 0 term
EC
PANTHER col4a1
KEGG Pathways
KOG
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience
Antibody Col1a1 Ab1
Affymetrix 1.0 Str.31614.1.S1_at [+] Xl.21561.1.S1_at [+]
Affymetrix 2.0 Xl2.21561.1.S1_at [+]

Symbol legend[+]

My Xenbase: [ Log-in / Register ]
version: [4.5.0]

Major funding for Xenbase is provided by the National Institute of Child Health and Human Development, grant P41 HD064556