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Summary Expression Gene Literature (10) GO Terms (2) Nucleotides (1656) Proteins (26) Interactants (67) Wiki
XB-GENEPAGE- 6258378

Gene Symbol: col1a1

Gene Name: collagen, type I, alpha 1

Synonyms:
Add Xenopus synonyms , Nomenclature history

Gene Function:

Protein Function:


Interactants: YYY

OMIM Disease Associations: OSTEOPOROSIS [+]
1/2
 
Xenbase Gene ID XB-GENE-6258379 XB-GENE-17337193 XB-GENE-6253424
Gene Symbol col1a1 col1a1.L col1a1.S
Chromosome Chr10 chr9_10L chr9_10S
Molecules tropicalis laevis.L laevis.S
Gene GBrowse 8.0 JBrowse 8.0 GBrowse 7.1 JBrowse 7.1 GBrowse 4.1 JGI Genome 4.1 Ensembl 4.1 GBrowse 9.1 JBrowse 9.1 GBrowse 9.1 JBrowse 9.1 GBrowse 6.0
Entrez Gene
Entrez Gene
Entrez Gene
mRNA Refseq NCBI Nucleotide Refseq
Protein Refseq TrEMBL NCBI Protein TrEMBL Refseq TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
GBrowse
tropicalis genome v8.0 gene model
GBrowse
laevis genome v9.1 gene model
GBrowse
laevis genome v9.1 gene model
Links
Genomic Synteny Genomicus
Expression tropicalis laevis.L laevis.S
Ensembl Ensembl
UniGene Str.68477 [+] Xl.47042 [+]
RNA-Seq profile Stage profile: Stage profile:       Tissue heatmap:
Images 19 expression image(s) for tropicalis and laevis
Data Mining tropicalis laevis.L laevis.S
XenMine col1a1 col1a1.L col1a1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
OMIM:Gene, HGNC, GeneCards COL1A1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI Col1a1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN ZFIN col1a1b col1a1a ZFIN Ensembl
chicken
GEISHA COL1A1 Ensembl
fruit fly
worm
WORMBASE
Publications
First: Retrovirus-induced interference with collagen I gene expression in Mov13 fibroblasts is maintained in the absence of DNA methylation. [Mol Cell Biol 1991]
Most recent: Persistent fibrosis, hypertrophy and sarcomere disorganisation after endoscopy-guided heart resection in adult Xenopus. [PLoS One 2017]
View All Papers 1 paper(s) referencing morpholinos
Functional Ontologies tropicalis laevis.L laevis.S
GO 2 terms 1 terms 2 terms
EC
PANTHER col1a1
KEGG Pathways K06236 K06236 K06236
KOG
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
GE Dharmacon GE Dharmacon GE Dharmacon
Source BioScience Source BioScience
Antibody Col1a1 Ab1
ORF col1a1 ORF1
Affymetrix 1.0 Str.8427.1.S2_at [+] Xl.26213.1.S1_at [+]
Affymetrix 2.0 Xl2.47042.2.S2_a_at [+]

Symbol legend[+]

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