krt Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (5)

Nucleotides (2191)

Interactants (58)

XB-GENEPAGE-6454252

[provisional- machine annotated only] Gene Symbol: krt Gene Name: keratin [Predicted: Source is Tropicalis Entrez Gene] Synonyms: xk70 Add Xenopus synonyms Gene Function: Ankyrin repeat protein Interactants: mark3(2) , ss18l1(2) , tfap2a(2) , xk81a1(2) , acss2.2(1) , ag1(1) , ascl1(1) View All

XB-GENE-6454253

XB-GENE-6252602

XB-GENE-6253629

Molecules		tropicalis	laevis a		laevis b
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene		Entrez Gene
mRNA		Refseq >NM_001006686\|Xenopus (Silurana) tropicalis keratin (krt), mRNA ACTGCTACATTGGGCCCCTTAACATTACAGCATCACAATGAGTTTCTCTACCCGAAGTGTCTCTCAATCCTCCCGCTATGGTGTTCTGGCATCACCCATGGTGAATCGGGCCCTAAGTGTGGCAGGGGGTGCCCAGACTGTCCGGATGTCCTCTGCTAAACTGACCAGCTCTGCGTTTGCCGGACCCTCTGCCCTTGATGTTAGCTCCTTTGGCAACAATGGCAAGGAGACAATGCAGAACCTGAACGATCGTCTGGCCAGCTACCTGGAACGGGTCCGTTCCTTGGAGCAAGCCAACCATGAGCTGGAGCTGAAGATCAGGGAGTACTGTGAGAAGAAAGCTGCCATTGGCTCCCCTGATGTTAGCGGTTACTATAACATCATCAACTTACTGCGCTCCCAGATCAATGATGCAAGCATTGACAATGCCAGGCTGGTCCTCCAGATCGACAATGCCAAGCTGGCAGCTGATGACTTCAAAATCAAGTATGAGTCAGAGCTGGCCATTAGGACTGGAGTCGAAAGCGACATTATCGGACTGCGCAGAGTCCTCGATGAGCTGACCCTCAATAAGACAGACCTGGAGTTGGAGATTGAAAGTCTGAAGGAAGAGCTGATTTACCTAAAGAAAAATCATGAAGAGGAACTTGCTGTTGCTAGGGCCAGTGCCAGAGGCCAAGTTGATGTACAGGTTGATTCTGCTCCTCCTGTTGACCTGTCACAGATCATGTCTGATGTGAGGGCTCAGTATGAAGGCATGATGGAGAAGAACCGCCAGGAGGTGGAAGCCTGGTACAGAGGACAGAGCGAAAATCTCAACAAAGAAGTTGCCACCAACACAGCTGCTCTCCAGACATCTAAGTCGCAGATTACAGACCTGAAGCGCACAATACAGAGCCTGGAGATTGAACTTCAGTCACTCTTGAGCATGAAAGGAGCACTGGAAGGCACTTTGGCAGAAACCGAGGCCCGATATGGAGCTGAGCTCAACCACCTTCAGGCCATGATCACGCAAATAGAATTAGACCTTCAAAACTTACGGTCAGATGCCGAGCGCCAGTCTTTGGAGTATAAGTTGTTGCTCGATGCCAAGACAAGGCTGGAAATGGAAATTTCCACCTACAGACGCCTGCTAGAAGGAGAAGACACCAGATTTTCCCAGACTGAAACACAGAAAGCTGTTACCATCGTCAGTAAGGAACAAAGCAAGAGCTCCATCAAAAAGGTGAAGACGGTGATCGAAGAAGTAGTCGACGGGAAAGTGGTCTCTTCTAGGGTCGAGGAAGTGACTGAGAAATCCTAAAAAGAATCTTAAGAATTAAGAGCCTGTACCTGAGAAAGGGCAGCAGAAGAGTTGAAATAACATAGTCTTGAAGGCAACCAAGAAGCTTCATTTTAAAATGTAGCCTATACGTAAATGTTTAATATGACAGAGAAGATATGAAAGCAGAAGAGAAATTAGCAAAATAAATGTCATGTAATGCAAACCTAGGCTGTTTGTGTTTAACTCTTCCTCAGGGACAATGCATCCAAATAAAGAATTTTAAGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA	Refseq >NM_001087819\|Xenopus laevis keratin (krt-a), mRNA CACAAGGGAACAACTCACCACTGCTACGTTGGCCCCTTAACATTACAGCATCACAATGAGCTACTCTACTCGCAGTATCTCTCAGTCGGCCCGCTTTGGGGTCCTTGCATCACCCGGAGTGAATCGGGCCCGCAGTGTGGCAGGAGGTGCCTCAACTGTCCGCATGTCATCGGCTAATGTGACCAGCTCAGCCTTTGGGGGATCCTCAGCCTTTGCAGGGTCCTCAGCCTTTGCAGGATCCCCAGCCTTCAATGTTAGTGTCACCAGCAACAATGGCAAGGAGACCATGCAGAACCTGAATGATCGTCTGGCCAACTACCTGGACCGAGTCCGTTCCCTGGAGCAAGCCAACCATGAACTAGAGCTGAAGATCAGAGAATACCTTGACAAGAAAGCAGCAGTTGGCTCCCTTGATTATAGTGGTTACTATAATACCATCAACTTACTGCGCTCCCAGATCAATGACGCAACCATTGACAATACCAGGCTGGTCCTCAGTATAGATAATGCCAAGCTGGCAGCCGATGACTTCAAAATCAAGTATGAGTCGGAGATGGCCATTAGGACTGGAGCAGAAAGTGACATAGTTGGACTGCGCAGAGTCCTTGATGAGCTGACCCTCAATAAAACAGACCTGGAGTTGGAGATTGAAAGTCTGAAGGAAGAGCTGATCTACCTAAAGAAAAATCATGAAGAGGAACTTGCTGTTGTTCGTAGCAGTGCTAGAGGCAATGTGGACGTACAGGTAGATTCTGCTCCTCCTGTGGATCTGGCACAGATCATGGCTGATGTGAGGTCTCAGTATGAAAGTATGATGGAGAAGAACCGCCAGGAGTTGGAAGCCTGTTACAAAGGACAGAGTGAAAATCTCAACCATGAAGTTGCCACCAACACAGCTGCTCTCCAGACATCTAAGACAGCAATTACAGACCTGAAACGCACAATACAAAGCTTGGAGATTGAACTTCAGTCTCTCTTGAGCATGAAAGGGGCACTGGAAGGGACTTTGGCAGAAACCGAGGCCCAATACGGGGCTCAGCTCAACCATCTGCAGGCGATGATCACACAAGTGGAAATGGAGCTTCAAAACTTACGGTCAGATGCCGACCACCAGTCTTTGGAGTATAAGAGGTTGCTAGATGCCAAGACAAGACTGGAAATGGAAATTGCCACCTACAGACGCCTACTGGAAGGAGAAGACACCCGATTTTCCCAGACTGAAACACAGAAAGCTGTTACCATCGTCAGTAAAGAGCAGAGCTCGAGTTCCATCAAAAAGGTGAAGACTGTGATTGAAGAAGTCGTTGACGGGAAAGTGGTCTCTTCTAGAGTTGAGGAATTGACTGAAACATCCTAAAGAGAATCTTGAGATTGAAGAGCGTGTACCTGAGGAAGGGCAATAGAAGAATTGAAGTCAACCAAGAAGTTTGACAGTAAAATGTCGCCAATTGTAGCTACGTTTATAATATGACAAAAGAGAGCGTAAAGAAAAATAAATGTCAGTGGGTGATGCCAAATCCGGCATATGTCTATGTTTGACTCTTCCTTAGGGATAACGCATCCGAATAAAGAATTTCAAGTGAAAAAAAAAAAAAAAA		Refseq >NM_001087241\|Xenopus laevis keratin (krt-b), mRNA CTACCACGTTGTTCTCTTAACATTACAGCATCACAATGAGCTTCTCTACCCGCAGTATCTCTCAGTCGGCCCGCTTTGGGGTTTTTGCATCACCCGGAGTGAATCGGGCCCGCAGTGTGGCAGGAGGTGCCTCAACTGTCCGCATGTCATCGGCTAACATGACCAGCTCAGCCTTTGCAGCATCCCCAGCCTTCGAAGTTGGTGTCACCAGCAACAATGGCAAGGAGACCATGCAGAACTTGAATGATCGTCTGTCCAACTACCTGGAGCGAGTCCGTTCCCTGGAGCTAGCCAACCATGAACTGGAGCGGAAGATCCGAGAGTACCTTGACAAGAAAGCAGCAGTTGGCTCCATGGATGTTAGTGGTTACTATAAAACCATCAACTTACTGCGCTCCCAGATCAATGATGCAACCATTGACAATACCAGGCTGGTCCTCAGTATAGATAATGCCAAGCTGGCAGCTGATGACTTCAAAATCAAGTATGAGTCAGAGTTGGCCATTAGGACTGGAGCAGAAAGTGACATTGCCGGACTGCGCAGAGTCCTTGATGAGCTGACCCTCAATAAAACAGACCTGGAGTTGGACATTGAAAGTCTGAAGGAAGAGCTGATCTACCTAAAGAAGAGTCATGAAGAGGAACTTGCTGTCGTTCGTAGCAGTGCTAAAGGCAACGTGGACGTACAGGTAGATTCTGCTCCTCCTGTGGACCTGGCACAGATCATGACTGATGTGAGGGCTCAGTATGAAAGTATGATGGAGAAGAACCGCCAGGAAGTGGAAGCCTGGTACAGAGGACAGAGTGAAAATCTCAACAAAGAAGTTGCCATCAACACAACTGCTCTCCAGACATCTAAGTCAGAAATTACAGACCTGAAACGCACAATACAGAGCCTGGAAATTGAACTTCAGTCTCTCTTGAGCATGAAAAACGCACTGGAAGGCACTTTGGCAGAAACTGAGGCCCGCTACGGATCTGAGCTCAACCATCTTCAGGCGATGATCACGCAAGTGGAATTGGAGATGCAAAACTTACGGTCAGATGCCGAGCGCCAGTCTTTTGAGTATAAGTTGTTGCTAGATATCAAGACAAGACTGGAAATGGAAATTGCCACCTACAGACGCCTGCTGGAAGGAGAAGACAACAGGTTTTCTCAGACTGAAACACAGAAAGATGTCACCATCATCAGTAAAGAGCAAACCAAAAGTTCCATCAAAAAGGTGAAGACAGTGATTGAAGAAGTTGTCGACGGGAAAGTGGTCTCTTCTAGAGTTGAGGAAATGACTGAGAAATTGTAAAAGAGAATCCTGAGATTTCAGAGCGTTCACCTGAGGAAGGGCAACAGAAGAGTTGAAGACGACTAAGACGTTTTCTTGCAAAATATTGCCAACTATAGCTACGTTCATAATATGACAAAAGAGACAGTAAAGAAAAATAAATGTCAGTTGGTGATGCAAAATGCAGCAAATGTTTGTTTAACTCTTCTTTAGGGACAATGCATTGAAATAAAGAATATTAAGTGAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001006687\|keratin [Xenopus (Silurana) tropicalis] MSFSTRSVSQSSRYGVLASPMVNRALSVAGGAQTVRMSSAKLTSSAFAGPSALDVSSFGNNGKETMQNLNDRLASYLERVRSLEQANHELELKIREYCEKKAAIGSPDVSGYYNIINLLRSQINDASIDNARLVLQIDNAKLAADDFKIKYESELAIRTGVESDIIGLRRVLDELTLNKTDLELEIESLKEELIYLKKNHEEELAVARASARGQVDVQVDSAPPVDLSQIMSDVRAQYEGMMEKNRQEVEAWYRGQSENLNKEVATNTAALQTSKSQITDLKRTIQSLEIELQSLLSMKGALEGTLAETEARYGAELNHLQAMITQIELDLQNLRSDAERQSLEYKLLLDAKTRLEMEISTYRRLLEGEDTRFSQTETQKAVTIVSKEQSKSSIKKVKTVIEEVVDGKVVSSRVEEVTEKS	Refseq >NP_001081288\|keratin, type I cytoskeletal 47 kDa [Xenopus laevis] MSYSTRSISQSARFGVLASPGVNRARSVAGGASTVRMSSANVTSSAFGGSSAFAGSSAFAGSPAFNVSVTSNNGKETMQNLNDRLANYLDRVRSLEQANHELELKIREYLDKKAAVGSLDYSGYYNTINLLRSQINDATIDNTRLVLSIDNAKLAADDFKIKYESEMAIRTGAESDIVGLRRVLDELTLNKTDLELEIESLKEELIYLKKNHEEELAVVRSSARGNVDVQVDSAPPVDLAQIMADVRSQYESMMEKNRQELEACYKGQSENLNHEVATNTAALQTSKTAITDLKRTIQSLEIELQSLLSMKGALEGTLAETEAQYGAQLNHLQAMITQVEMELQNLRSDADHQSLEYKRLLDAKTRLEMEIATYRRLLEGEDTRFSQTETQKAVTIVSKEQSSSSIKKVKTVIEEVVDGKVVSSRVEELTETS UniProtKB		Refseq >NP_001080710\|keratin [Xenopus laevis] MSFSTRSISQSARFGVFASPGVNRARSVAGGASTVRMSSANMTSSAFAASPAFEVGVTSNNGKETMQNLNDRLSNYLERVRSLELANHELERKIREYLDKKAAVGSMDVSGYYKTINLLRSQINDATIDNTRLVLSIDNAKLAADDFKIKYESELAIRTGAESDIAGLRRVLDELTLNKTDLELDIESLKEELIYLKKSHEEELAVVRSSAKGNVDVQVDSAPPVDLAQIMTDVRAQYESMMEKNRQEVEAWYRGQSENLNKEVAINTTALQTSKSEITDLKRTIQSLEIELQSLLSMKNALEGTLAETEARYGSELNHLQAMITQVELEMQNLRSDAERQSFEYKLLLDIKTRLEMEIATYRRLLEGEDNRFSQTETQKDVTIISKEQTKSSIKKVKTVIEEVVDGKVVSSRVEEMTEKL

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny		Metazome

Expression		tropicalis	laevis a		laevis b
UniGene		Str.5132 [+] Str.5387 Str.36769 Str.65275 Str.68364 Str.41783 Str.54600	Xl.6133 [+] Xl.78408		Xl.76286
Unigene EST Profile		EST Profile	EST Profile		EST Profile
GEO data			GEO		GEO
Images		12 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human
mouse
zebrafish

Publications
First:		Developmentally regulated cytokeratin gene in Xenopus laevis. [Mol Cell Biol 1985]
Most recent:		Neural crest specification by noncanonical Wnt signaling and PAR-1. [Development 2011]
		View All Papers

Functional Ontologies
GO: Molecular:		structural molecule activity
Biological:
Cellular Component:
EC:
KOG:		[R] Ankyrin repeat protein

Reagents		tropicalis	laevis a		laevis b
Clones		open biosystems	open biosystems		open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes		geneservice/RZPD imagenes
Affymetrix 1.0		Str.6681.1.S1_a_at [+] Str.41783.1.A1_x_at Str.41783.1.A1_at Str.30584.2.A1_x_at Str.30584.1.A1_x_at Str.6681.2.A1_at Str.46000.1.A1_x_at Str.5387.1.A1_at Str.5132.1.A1_at Str.47497.1.S1_at Str.47497.1.S1_s_at	Xl.6133.1.S1_a_at [+] Xl.6133.1.S1_at Xl.6133.3.A1_x_at Xl.6133.2.A1_x_at		Xl.23326.1.S1_at
Affymetrix 2.0			Xl2.6133.1.S1_a_at		Xl2.23326.1.S1_at

Symbol legend[+]