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Summary Expression Gene Literature (17) GO Terms (13) Nucleotides (1659) Proteins (27) Interactants (264) Wiki
XB-GENEPAGE-6258378

Gene Symbol: col1a1

Gene Name: collagen, type I, alpha 1

Synonyms: ( Add Xenopus synonyms , Nomenclature history )

Gene Function:

Protein Function :

Interactants: Loading ...
Disease Ontology: osteogenesis imperfecta type 1 [+]

OMIM Diseases: OSTEOPOROSIS [+]

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Xenbase Gene ID XB-GENE-6258379 XB-GENE-17337193 XB-GENE-6253424
Gene Symbol col1a1 col1a1.L col1a1.S
Chromosome Chr10 chr9_10L chr9_10S
Molecules tropicalis laevis.L laevis.S
Gene Genomic sequence Genomic sequence Genomic sequence
CDS Gene model
Entrez Gene
Entrez Gene
Entrez Gene
mRNA Refseq NCBI Nucleotide Refseq
Protein Refseq TrEMBL TrEMBL NCBI Protein TrEMBL Refseq TrEMBL
Genomic tropicalis laevis.L laevis.S
Genome Browser
Genomic Synteny Genomicus PANTHER
Expression                  Development Stages    Embryonic TissuesAdult Tissues
Summary for
More Information
Xenbase Expression Details In situ images Single cell data at SPRING Ensembl In situ: Single cell: RNA-Seq:
Proteomics tropicalis laevis.L laevis.S
Embryonic Protein Expression Stage profile: Stage profile:
Data Mining tropicalis laevis.L laevis.S
XenMine col1a1 col1a1.L col1a1.S
Phenotype tropicalis laevis.L laevis.S
Smith Morpholino Screen    
Orthology
MOD Entrez Gene Genetic Phenotypes Gene Expression
human
COL1A1 OMIM, MalaCards, KEGG Disease, DECIPHER Ensembl, Protein Atlas, Allen Brain Atlas
mouse
MGI, AGR Col1a1 MGI, IMPC Ensembl, Eurexpress, MGI, Allen Brain Atlas
zebrafish
ZFIN, AGR ZFIN, AGR col1a1b col1a1a ZFIN Ensembl
chicken
GEISHA COL1A1 Ensembl
fruit fly
worm
WORMBASE
Publications
First Retrovirus-induced interference with collagen I gene expression in Mov13 fibroblasts is maintained in the absence of DNA methylation., Mol Cell Biol 1991  
Most Recent Transcriptome profiling reveals male- and female-specific gene expression pattern and novel gene candidates for the control of sex determination and gonad development in Xenopus laevis., Dev Genes Evol 2019          
All View All Papers 1 paper(s) referencing morpholinos 2 paper(s) referencing Disease Ontology
Functional Ontologies tropicalis laevis.L laevis.S
GO 13 terms 1 terms 2 terms
PANTHER col1a1
KEGG Pathways K06236 K06236 K06236
KOG
Reagents tropicalis laevis.L laevis.S
CRISPR / TALEN CRISPR tools CRISPR tools CRISPR tools
Clones
Dharmacon Dharmacon Dharmacon
Antibody Col1a1 Ab1 Col1a1 Ab1
ORF col1a1.S ORF1
Affymetrix 1.0 Str.8427.1.S2_at [+] Xl.26213.1.S1_at [+]
Affymetrix 2.0 Xl2.47042.2.S2_a_at [+]

Symbol legend: - Blast this sequence    - View this sequence       - Literature or expression images  
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Version: 4.11.2


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