col1a1 Summary [species: Xenopus laevis and Xenopus tropicalis] - Xenbase Gene Catalog

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Summary

Gene Literature (4)

Nucleotides (1653)

Interactants (12)

XB-GENEPAGE-6258378

[provisional- machine annotated only] Gene Symbol: col1a1 [Predicted: Source is Human Entrez Gene] Gene Name: collagen, type I, alpha 1 [Predicted: Source is Human Entrez Gene] Add Xenopus synonyms Gene Function: Interactants: en1(1) , mmp1(1) , myf5(1) , myod1(1) , myrf(1) , pax3(1) , pcna(1) View All	1/2

XB-GENE-6258379

XB-GENE-6253424

Molecules		tropicalis	laevis
Gene		JGI XT Genome 7.1 JGI XT Genome 4.1 Ensembl 4.1	JGI XL Genome 6.0
		Entrez Gene	Entrez Gene
mRNA		Refseq >NM_001011005\|Xenopus (Silurana) tropicalis uncharacterized LOC496414 (LOC496414), mRNA CTGGGAGATATACCACTAAACCTACCCCTGTATGACTAGGAACTGAGAAGAAACCAGAAAGGACCACAGAGAGTCTACATGTCTATTTAGACATGTTCAGCTTTGTGGATACACGGACCCTGCTACTTATAGCAGCAACAATCCTAGTAGCAAGATGTCAAGGAGAAGATGACGTTCAAGATTACGACTGCGTTCAACATGGTATCAGGTATAACAACAAAGATGTATGGAAACCCGAGGAGTGCCAGATCTGCGTGTGCGACAATGGAAACATCCTTTGCGACGAAGTGATCTGTGAAGATGCAGACTGCCCCGACCCTAAAATGGTACAGGGCGAATGCTGTCCCATGTGCATTGGCAATGATGCTCAGTTTTCCGAAGTCACTGGAGTAGAGGGCCCCAAGGGAGATATTGGTCCCAGGGGAGACAGAGGACCTGCTGGCCCACCTGGCAGAGATGGCATTCCCGGACAGCCTGGAATTCCTGGACCTCCAGGCCCTCCTGGCCCACCTGGCCTTGGCGGAAACTTTGCTCCTCAAATGTCTTATGGTTATGATGAGAAATCTGCTGGTGTTTCAATGCCTGGTCCCATGGGCCCAATGGGTCCCCGCGGTCCTCCTGGCCCATCTGGATCACCTGGACCCCAAGGTTTCCAAGGACCCCCTGGTGAACCTGGTGAACCCGGTTCTTCTGGTGCAATGGGACCCCGTGGCCCAGCAGGACCTCCAGGAAAGAACGGTGAAGATGGTGAAGCTGGCAAACCAGGCCGCCCCGGTGAGCGTGGACCCCCAGGACCCCAGGGTGCCCGTGGTCTTCCAGGAACAGCTGGTCTTCCAGGCATGAAGGGCCACAGAGGCTTCAACGGTCTTGATGGTGCAAAGGGTGACTCTGGTCCTGCTGGTCCTAAGGGTGAGCCTGGTTCCCCTGGTGAGAATGGCGCTCCTGGGCAAGTGGGTCCTCGTGGTCTCCCTGGTGAGAGAGGTCGTCCTGGTCCATCTGGCCCTGCTGGTGCACGTGGTAACGATGGTGCTCCTGGTGGTGCTGGCCCCAATGGTCCCACTGGCCCAGCTGGACCCCCTGGCTTTCCAGGAGGTGTTGGTCCCAAGGGTGATGCTGGTCCCCAAGGGTCTCGTGGTCCTGATGGTCCCCAAGGTGGTCGTGGTGAACCTGGTGCCCCTGGTCAAGCTGGTGCTGCTGGTCCTTCTGGAAACCCTGGTAGTGATGGTCAAGCTGGTGCTAAGGGTGCCACTGGCGCTCCTGGTATTGCTGGTGCTCCTGGCTTCCCAGGTGCTCGTGGTGCTCCTGGACCTCAAGGCCCTGGAGGTGCTCCTGGCCCCAAGGGTAACAATGGTGAACCTGGTGCTCAAGGAAACAAGGGTGAGCCTGGTGCCAAGGGAGAATCTGGCCCAGCTGGTGTTCAAGGCCCCCCAGGACCTTCTGGTGAAGAAGGAAAGAGAGGATCCCGTGGTGAGCCTGGACCTGCTGGACCTCCCGGACCTGCTGGTGAACGTGGTGCCCCTGGCAGCCGTGGTTTCCCTGGATCTGATGGTGCCTCTGGACCTAAGGGTGGTCCTGGTGAACGTGGTCCCGTTGGCCCTGCTGGTGCTAAAGGATCTCCTGGTGAATCTGGACGCCCTGGTGAACCTGGTCTTCCCGGTGCTAAGGGTCTGACTGGTAGCCCTGGCAGCCCTGGTCCTGATGGCAAAACTGGACCTGCTGGTGCCCCTGGTCAAGATGGCCGTCCTGGACCTCCTGGACCACCAGGTGCTAGAGGCCAGTCTGGAGTAATGGGATTCCCTGGACCTAAAGGAGCTGCTGGTGAACCTGGAAAGTCTGGTGAGAGAGGTGTTGCTGGTCCTCCTGGTGCTGTTGGTCTTCCTGGCAAAGATGGTGATGCTGGAGCTCAAGGTCCCCCTGGCCCTGCTGGTCCTTCTGGTGAGAGAGGTGAACAAGGTCCTGCTGGTGGTCCTGGCTTCCAAGGTCTTCCTGGTCCCCCAGGTCCTGCTGGAGAGAGTGGCAAACCTGGTGAACAGGGTGTTCCTGGAGATGTTGGTCCTTCTGGTCCTGCTGGTGCAAGAGGTGAAAGAGGTTTCCCTGGTGAACGTGGCGCTCAAGGTCCCCCTGGCCCTCAGGGACCACGTGGTTCTAATGGTGCTCCTGGCAATGATGGTGCTAAGGGTGAAGCTGGTGCTTCTGGTGCCCCTGGTGGCCAAGGACCTCCCGGTCTTCAGGGAATGCCCGGTGAACGCGGTGCTGGTGGTCTTCCTGGTGCAAAGGGTGACAGAGGTGACCAAGGAGTTAAAGGCAGTGATGGTGCACCTGGCAAAGATGGTGTCAGAGGTCTGACTGGTCCAATTGGTCCACCTGGTCCAGGTGGTGCTCCTGGTGACAAGGGTGAAGCTGGTCCTGCTGGTCCTGCTGGCCCAACTGGTGCCCGTGGTGCTCCTGGTGAGCGTGGAGAGTCTGGCCCCCCTGGCCCTGCTGGATTTGCTGGTCCCCCTGGTGCTGATGGACAACCTGGAGCTAAGGGAGAACAAGGAGATGCTGGTGCTAAGGGTGATGCTGGTCCTCCAGGCCCTGCTGGCCCCACTGGTGCTCCTGGACCTGCTGGTGCTCTTGGAGCTACTGGACCCAAAGGTGCTCGTGGTGCTCCTGGACCCCCAGGTGCAACTGGTTTCCCTGGTGCTACTGGAAGAGTTGGACCTCCAGGCCCTGCTGGCAATTCTGGACCTCCTGGCCCATCTGGCCCTGCTGGAAAGGAAGGAGCAAAGGGACCTCGTGGTGAGACTGGCCCAGCTGGCCGTCCTGGTGAACCTGGTGCTGCTGGACCCGCAGGACCTCCTGGAGAAAAAGGCTCCCCTGGTAGTGATGGCCCTGCTGGTGCCCCTGGTATTCCTGGACCTCAAGGTGTTGCTGGATCTCGCGGTACTGTTGGTCTTCCAGGAATGAGAGGAGAAAGAGGCTTCTCTGGTCTTCCCGGACCAGTTGGTGAACCTGGCAAGCAAGGTCCCTCTGGCCCCAGTGGTGAACGTGGTCCACCTGGTCCTTCTGGCCCTCCAGGCTTAGCTGGACCTCCTGGTGAAGCTGGTCGTGAGGGTGCTCCTGGCAGTGAAGGTGCTCCTGGTCGTGATGGTGCTGCTGGACCCAAGGGTGATCGTGGTGAGGGTGGACCTGCTGGTCCACCTGGTGCTCCCGGTGCCCCTGGTGCTCCTGGCCCAGTTGGTCCTGCTGGAAAGAGTGGAGATCGTGGTGAGACTGGTCCTGCTGGCCCTGCTGGTCCCGCTGGTGTTGCTGGTGCTCGTGGTCCCGCTGGTCCTCAAGGCCCACGTGGTGACAAGGGTGAAGCTGGAGAACAAGGTGAGAGAGGTATGAAGGGACACAGAGGATTCAACGGACCTGCTGGACCACCTGGCCCCCCTGGCTCCTCTGGTGAACAAGGTCCATCTGGTGCTTCTGGTCCTGCTGGTCCAAGAGGTCCCCCTGGATCTTCTGGTAATCCTGGTAAAGATGGCGCTAATGGTCTGCCTGGTCCTATTGGTCCTCCTGGTCCACGTGGTCGTACTGGTGATGTTGGTCCTGCTGGTCCCCCTGGACCTCCTGGACCTCCTGGTCCTCCTGGCGCATCAGGTGGTGGATTCGACTTCAGCTTCATGCCTCAGCCACCTCAGGAGAAATCCCACGATGGCCGCTTCTACCGCGCTGATGATGCCAACGTAATGCGTGACCGTGACCACGAAGTTGACAGCACTCTCAAGAGCCTGAGCAAACAGATTGAAAACATCCAAAGCCCAGAGGGTACCAGAAAGAACCCAGCCCGTACCTGCCGTGACCTAAAGATGTGCCATTCTGACTGGAAGAGCGGTGAATACTGGATTGATCCCAACCAAGGCTGCATCCTTGATGCCATTAAGGTCTATTGTAACATGGAGACTGGAGAGACCTGCGTATACCCAACCCAGAACAGCATTGCACAGAAGAACTGGTACACTAGCAAGAACCCACGTGAGAAGAAGCATGTCTGGTTCGGCGAGGCAATGAGTGATGGATTCCAGTTCGAATATGGCAGTGAAGGATCTGACCCAGCTGATGTTGCCATCCAACTTACCTTCCTGCGCCTTATGGCCACTGAAGCCTCTCAGAACATCACTTACCATTGCAAGAACAGCGTTGCTTACATGGACCAAGCTACAGGCAACCTGAAGAAGGCCCTGCTCCTGCAAGGCTCCAATGAAATCGAGATCAGAGCAGAGGGCAACAGCCGATTCACATACAGTGTTGTAGAGGATGGTTGCACGCAACACACAGGAGAATGGGGCAAGACAGTAATTGATTACAAGACAACAAAGACATCACGCCTGCCCATTACCGATGTGGCACCCATGGATATCGGAGCCCCAGATCAGGAATTCGGAATTGACATCGGACCAGTCTGCTTCGTGTAAAACAAAACACACAACACAAATACCAGGACAAGAGATTATCTCATGTGGACTTGAAATTGTTGTTCCTCTCATCTCTAAAACTTTTCTTGTTTCCGTAAGCATTACACGAAAAAGCGAACCGATAGTCATGCTTTGAAGAACATCTCTCAAAGGACAGACCACGCCCATGTGTGTGTGTGTGTATGTGTTTGTGTTCACGGGAGGGAGAGTTCCACCAATCTGATCAGCCACGCCCCTTGCATACATGAATTGGCCTTCCTAGGACCTTGAAGACAGAATGGGACAAGCCCAAAAAGAAGAATGGGATATACTTAAACATACTGTTCCTGGATTTGAAATGACTAGAATGTGGGATCAATGACCCCAGCCAGGTTCCCCAGAGAAGAAGAGGAGTAAACCAAAACATTTCATGTAATGCACCTTTATTTTTTTTGTTTTCATTTGTTCAGGTGGCAAAAAAATAAATACGAAAAAAAAAATCAAATTGAAGGTGTGTGCAGAGTATTTTGGAATCATCAAAGAGTTGGGTTTGCCCTCTGGGTGTGAGTGTTAGATCTCACTTACTTTTCCATCATCTTTGAAGGCCATTTTCTTCTGAGCTGGTCTTTATCCATTTTATTCTGGAGTCTCCCCAGCTCATTGAATAACAGGTTTCTCCAGTATGAAAAGGGTAAAGTTTCAATTGCTTTCTCTGTTGTGCAGTGTAGAAAATTAATTATTTTATTTTCCTGAGGCTACCTCACTGTCTTGTCCCCTTCCATTGGTGCTAACGTCTCACTGCTTCTACATATAAACTTCAAAGCTATAAGAATTGGTGCTAAACTCAACACTAGAAGGGATCTCCTTGCCATGTATATGTCCCAGTGTGACACTTGAGAATTTAAAGGTGCTACTATTTAAAATCGCTCCCTTTCATTCCATTTCTCTCAACTCTAATCCCCCACCCCCCTTTCCCGTGAACATACGTTACAAGGTCTTGTCTGTGTTGGTAGCATTTCCATTTCTTGTTTTGCTTCTTTCTCTCTTCATTTGTCCATACTTTCTTTGCCCCTTTCTCTTGATTCCCTCCTTCTCTTTTGTTTCCTGTCTCTATTCTTCAACTTCATCCGACCCAAAAGTTGACAGCGATACCATGGGGTTTGAACTGAAACCGAGGATCTGTACCTGTTTTGTAATTGTATAATAATTTGAGATGTTTTTAATTATTTTGATTGCTGAAATAAAGCATGTGACATGGTCCAAAACAAAAAAAAAAAAAAAAAAAAAAAA	Refseq >NM_001087352\|Xenopus laevis collagen, type I, alpha 1 (col1a1), mRNA GTTCTGCTGGGGTCTGCACTGGGAGATATACCACTAAACCTACCCCTGTATGACTAGGAACTGAGAAGAAACAAGAAAGGACCACATAGAGTCTACATGTCTATTTAGACATGTTCAGCTTTGTGGATACACGGACCCTGCTGCTTATAGCAGCAACAATCCTAGTAGCAAGATGTCAAGGAGAACATGACGTTCAAACTTCCGACTGCGTCCAGCACGGTATCACTTATAGCAACAGAGATGTATGGAAACCCGAAGACTGCCAGATCTGTGTGTGCGACAATGGAAACATCCTTTGTGATGAAGTGATGTGCGAAGATGCCGACTGCCCCAACCCTGTGATTGTACCTGGCGAATGCTGCCCCGTCTGCACTGACAACGATGCCCAGTATTCCGAAGTGACTGGAGTAGAGGGCCCCAAGGGAGATGTTGGTCCCAAGGGAGACAAAGGCATTGCTGGTCCACCTGGCAGAGATGGCATTCCTGGACAACCTGGAATTCCTGGACCTCCAGGCCCACCTGGTCCACCTGGCCTTGGCGGAAACTTTGCTCCTCAAATGTCTTATGGTTATGATGAGAAATCTGCTGGTATTTCCATGCCCGGTCCCATGGGCCCAATGGGTCCCCGTGGTCCTCCTGGCCCATCTGGATCACCTGGACCCCAAGGTTTCCAAGGACCCCCTGGTGAACCCGGTGAACCCGGTGCTTCTGGTGCAATGGGACCTCGTGGATCATCAGGACCTCCCGGAAAGAACGGTGAAGATGGTGAAGCTGGCAAACCAGGCCGCCCCGGTGAGCGTGGACCCCCAGGACCCCAGGGTGCCCGTGGTCTTCCAGGAACTGCTGGTCTTCCAGGCATGAAGGGCCACAGAGGTTTCAATGGTCTTGATGGTGCAAAGGGTGACTCTGGTCCTGCTGGACCCAAGGGTGAGCCTGGTTCCCCTGGTGAGAATGGTGCTCCCGGACAAGTGGGTCCCCGTGGTCTCTCTGGTGAGAGAGGTCGCCCTGGTCCATCTGGCCCCGCTGGTGCCCGTGGTAACGATGGTGCTCCTGGCGCTGCTGGTCCCCCTGGTTCCACCGGCCCATCTGGACCCCCTGGCTTCCCAGGAGGTGTTGGTCCCAAGGGTGATGCTGGTCCCCAAGGATCTCGTGGTTCTGATGGTCCCCAAGGTGGTCGTGGTGAACCTGGTGCCCCTGGTCAAGCTGGTGCTGCTGGTCCTTCTGGAAACCCTGGTAGTGATGGTCAACCTGGTGCTAAGGGTGCCACTGGTGCTCCTGGTATTGCTGGTGCTCCTGGCTTCCCAGGTGCTCGTGGTGCTCCTGGAGCTCAAGGCCCTGGAGGTTCTCCTGGCCCCAAGGGTAACAATGGTGAACCTGGTGCTCAAGGAAACAAGGGTGAGGCTGGTGCAAAGGGAGAACCCGGCCCTGCTGGTGTTCAAGGCCCCCCAGGTCCTTCTGGTGAAGAAGGAAAGAGAGGATCCCGTGGCGAGCCCGGACCTGCTGGACCTCCCGGACCTGCTGGTGAACGTGGTGGCCCTGGAAGCCGTGGTTTCCCTGGATCTGATGGTGCCTCTGGACCTAAGGGTGCTCCTGGTGAACGTGGTCCTGTTGGCCCCGCTGGTCCTAAAGGATCTTCTGGTGAATCTGGCCGCCCTGGTGAGCCTGGTCTTCCCGGTGCTAAGGGTCTCACTGGTAGCCCTGGCAGCCCTGGTTCTGATGGCAAAACCGGACCTGCTGGTGCCCCTGGTCAAGATGGCCGCGCTGGACCCCCTGGACCACCAGGTGCAAGAGGCCAATCTGGAGTAATGGGATTCCCTGGACCTAAAGGTGCTGCTGGTGAACCTGGAAAGAATGGCGAGAAAGGTGTTGCTGGTCCCCCTGGTGCTGTTGGTCTTCCTGGCAAAGATGGTGATGCTGGCGCTCAAGGTCCCCCTGGCCCTGCTGGTCCAGCTGGTGAGAGAGGTGAACAAGGTCCTGCTGGTGGTCCTGGCTTCCAAGGTCTTCCTGGTCCCCCAGGCCCTGCTGGAGAGAGTGGCAAACCCGGTGAACAGGGTGTTCCTGGTGACGTCGGTCCTTCTGGTCCTGCTGGTGCAAGAGGTGAAAGAGGTTTCCCTGGTGAACGTGGTGCTCAAGGTCCCCCTGGTCCTCAGGGAGCACGTGGTTCTAATGGTGCTCCTGGTAACGATGGTGCTAAGGGTGAAGCTGGTGCTGCTGGTGCCCCTGGTGGTCAAGGACCTCCCGGTCTTCAGGGAATGCCCGGCGAACGTGGTTCTTCTGGACTTCCTGGTGCAAAGGGTGACAGAGGTGACCAAGGAGTTAAAGGCAGTGATGGTACACCTGGCAAAGATGGTGTCAGAGGTTTGACTGGTCCAATTGGTCCACCTGGTCCAGGTGGTGCTCCTGGTGACAAGGGTGAAGCTGGTCCTGCTGGTCCTGCTGGCCCAACTGGTGCCCGTGGTGCTCCCGGTGAGCGTGGTGAGAGCGGCCCCCCTGGCCCTGCTGGATTTGCTGGTCCCCCTGGTGCTGATGGACAACCTGGAGCTAAGGGAGAACAAGGAGATTCTGGTGCTAAGGGTGATGCTGGTCCTCCAGGCCCTGCTGGCCCCACTGGTGCTCCTGGACCTGCTGGTGCTCTTGGATCTCCAGGTCCCAAAGGTGCTCGTGGTGCTCCTGGACCCCCTGGTGCAACTGGTTTCCCCGGTGCTGCTGGAAGACTTGGACCCCCTGGCCCATCTGGCAATGCTGGACCTCCTGGCCCATCTGGCCCTGCTGGAAAGGAAGGCGCAAAGGGACCTCGTGGTGAGACTGGCCCAGCTGGACGTTCTGGTGAACCTGGTGCTGCTGGACCCCCAGGACCTCCTGGCGAGAAAGGTTCCCCTGGTAGTGATGGCCCTGCTGGTGCCCCAGGTATTCCTGGACCTCAAGGTGTTGCTGGATCTCGTGGTACTGTTGGTCTTCCAGGAATGAGAGGAGAAAGAGGCTTCTCTGGTCTTCCTGGACCAGCTGGTGAACCTGGCAAACAAGGTCCCTCTGGCCCCAGCGGTGAACGTGGTCCACCTGGTCCTTCTGGCCCACCAGGCTTGGGTGGACCTCCCGGTGAATCAGGTCGTGAGGGTGCTCCTGGTAGTGAAGGTGCTCCTGGTCGTGATGGTGCTGTTGGACCCAAGGGTGACCGTGGTGAGGGTGGACCTGCTGGTCCCCCTGGTGCTCCTGGTGCCCCTGGTGCTCCTGGCCCAGTTGGTCCTGCTGGAAAGAGTGGAGATCGTGGTGAGACTGGTCCTTCTGGCCCTGCTGGTCCCGCTGGTACCGCTGGTGCTCGTGGTCCCGCTGGTCCTCAAGGCCCACGTGGTGACAAGGGTGAAGCTGGAGAACAAGGTGAGAGAGGCATGAAGGGACATAGAGGATTCAACGGACCCTCTGGACCACCCGGCCCCCCTGGCTCCTCTGGTGAACAAGGTCCATCTGGTGCTTCTGGTCCTGCTGGTCCAAGAGGTCCCCCTGGATCTTCTGGCAATCCTGGTAAAGATGGTTCTAATGGTCTGCCAGGACCTATTGGTCCCCCTGGTCCACGTGGTCGTACTGGTGATGTTGGTCCTGCTGGTCCCCCTGGACCTCCTGGTCCTCCTGGTCCTCCTGGCCAATCAGGTGGTGGATTCGACTTCAGCTTCATGCCTCAGCCACCTCAGGAGAAATCTCATGATGGCCGCTTCTACCGTGCTGATGATGCCAATGTAATGCGCGACCGTGACCTGGAAGTTGACTCCACCCTCAAGAGTCTGAGCAAACAGATCGAAAACATCCGCAGCCCAGAGGGTACCAGAAAGAACCCAGCCCGCACCTGCCGTGACCTGAAGATGTGCCATTCTGACTGGAAGAGTGGTGAATACTGGATCGATCCCAACCAAGGCTGCATCCTTGATGCCATCAAGGTCTATTGTAACATGGAGACTGGAGAGACCTGCATCTACCCAACCCAGAGCAGCATTCCACAGAAGAGCTGGTACACTAGCAAGAACCTACGTGAGAAGAAGCATGTCTGGTTCGGCGAGGCAATGAGTGATGGATTCCAGTTTGAATATGGCAGTGAAGGATCTAACTCAGCTGATGTTACCATCCAACTTACCTTCCTGCGTCTCATGGCCACTGAAGCCTCTCAGAACATCACTTACCACTGCAAGAACAGCGTTGCTTACATGGACCAAGCTACCGGCAACCTGAAGAAGGCCCTGCTCCTGCAAGGCTCCAATGAAATCGAGATCAGAGCAGAGGGCAACAGCCGATTCACATACAGTGTTGTAGAGGATGGCTGCACGCAACACACAGGAGAATGGGGCAAGACAGTAATTGACTACAAGACAACAAAGACATCACGCCTGCCCATTACCGATGTGGCACCCATGGATATTGGAGCCCCAGATCAGGAATTCGGAATTGACATCGGACCAGTCTGCTTCGTGTAAAACAAAACACACAAAACAAATACCAGGACAAGAGATTATCTCATGTGGACTTGAAATTGTTGTTCCTCTCATCTCTAAAACTTTTCTTGTTTCCGTAAGCATTACACGAAAAAGCGAACCGATAGTCATGCTTTGAAGAACATCTCTCAAAGGACAGACCACGCCCATGTGTGTGTGTGTGTATGTGTTTGTGTTCACGGGAGGGAGAGTTCCACCAATCAGATCAGCCACACCCCCTGCATACATGAATTGGCCTTCCTAGGACCTTGAAGACAGAATGGGACAATCCCTAAGAAGAAGAATGGGATATACTGTTCCTGGGTTTTAAATGACTAGAATGTGGGATCAATGACCCCAGCCAAGTTCACCAGAGAAGAAGAGGAGTAAACCAAATCATTTCATGTAATGCACCTTTATTTTTTTTATTTTTTTGTTTTCGTTTGTTCAGGTGGCAAAAAAAATAAATATGAAAAAAAAATAAAATCGAAGTTGTGTGCAGAGTATTTTGGAATCATGAAAGAGTTGGGTGTGAGTGCTAAATCTCACTTACTATTTTATCATCTTTTGAAGACCATTTTCTTCCGAGTTGTTCTTTATCCTTTTTATTCTGGAGTCTCCCCAGCTCATCGAGTGACAGGTTTCTCCAGCATGAAAAGGGTCATTTCAATGGCTTTCTCTGTCGTGCAGTGTAGAAAATTAATTATTTTATTTTCCTGAGGCTACCTCACTGTCTTGTCCCCTTCCATTGGTGCTAACGTCTCACTGCTTCTACATATGAACTTCAAAGCTATAAGAATTGGTGCTAAACTCTACACTAGAAGGGATCTCCTTGCCATGTGTATGTCCCAGCATGACACTTGAGATTTTTAAGGTGCTACTATTTAAAATCCCTCCCTCTTGTACTATTTCTCTCAACCCATATCTCCTCTTTCCCGTGAACATACGTTATAAGGTCTTGTCTGTGTTGGTAGCATTTCCATTTCTTGTTTTGCTTCTTTCTCCCTTCCTTCATTTGTCCATACTTTTCTTTGCCCTTTCTCTCGATTCCCTCCACCTCCTCCTTTTTTTTTCTCCTGTCTCAATTCTTCAACTTCATCCGACCCAAAAGTTGACAGTGATACCATAGGGTTTGAACTGAAACCGAGGATCTGTACCTGTTTTGTAATTGTATAATAATTTGAGATGTTTTTAATTATTTTGATTGCTGAAATAAAGCATGTGACATGGTCCAAAACAAAAAAAAAAAAAAAAAAAAAAA
Protein		Refseq >NP_001011005\|uncharacterized protein LOC496414 precursor [Xenopus (Silurana) tropicalis] MFSFVDTRTLLLIAATILVARCQGEDDVQDYDCVQHGIRYNNKDVWKPEECQICVCDNGNILCDEVICEDADCPDPKMVQGECCPMCIGNDAQFSEVTGVEGPKGDIGPRGDRGPAGPPGRDGIPGQPGIPGPPGPPGPPGLGGNFAPQMSYGYDEKSAGVSMPGPMGPMGPRGPPGPSGSPGPQGFQGPPGEPGEPGSSGAMGPRGPAGPPGKNGEDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFNGLDGAKGDSGPAGPKGEPGSPGENGAPGQVGPRGLPGERGRPGPSGPAGARGNDGAPGGAGPNGPTGPAGPPGFPGGVGPKGDAGPQGSRGPDGPQGGRGEPGAPGQAGAAGPSGNPGSDGQAGAKGATGAPGIAGAPGFPGARGAPGPQGPGGAPGPKGNNGEPGAQGNKGEPGAKGESGPAGVQGPPGPSGEEGKRGSRGEPGPAGPPGPAGERGAPGSRGFPGSDGASGPKGGPGERGPVGPAGAKGSPGESGRPGEPGLPGAKGLTGSPGSPGPDGKTGPAGAPGQDGRPGPPGPPGARGQSGVMGFPGPKGAAGEPGKSGERGVAGPPGAVGLPGKDGDAGAQGPPGPAGPSGERGEQGPAGGPGFQGLPGPPGPAGESGKPGEQGVPGDVGPSGPAGARGERGFPGERGAQGPPGPQGPRGSNGAPGNDGAKGEAGASGAPGGQGPPGLQGMPGERGAGGLPGAKGDRGDQGVKGSDGAPGKDGVRGLTGPIGPPGPGGAPGDKGEAGPAGPAGPTGARGAPGERGESGPPGPAGFAGPPGADGQPGAKGEQGDAGAKGDAGPPGPAGPTGAPGPAGALGATGPKGARGAPGPPGATGFPGATGRVGPPGPAGNSGPPGPSGPAGKEGAKGPRGETGPAGRPGEPGAAGPAGPPGEKGSPGSDGPAGAPGIPGPQGVAGSRGTVGLPGMRGERGFSGLPGPVGEPGKQGPSGPSGERGPPGPSGPPGLAGPPGEAGREGAPGSEGAPGRDGAAGPKGDRGEGGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPAGVAGARGPAGPQGPRGDKGEAGEQGERGMKGHRGFNGPAGPPGPPGSSGEQGPSGASGPAGPRGPPGSSGNPGKDGANGLPGPIGPPGPRGRTGDVGPAGPPGPPGPPGPPGASGGGFDFSFMPQPPQEKSHDGRFYRADDANVMRDRDHEVDSTLKSLSKQIENIQSPEGTRKNPARTCRDLKMCHSDWKSGEYWIDPNQGCILDAIKVYCNMETGETCVYPTQNSIAQKNWYTSKNPREKKHVWFGEAMSDGFQFEYGSEGSDPADVAIQLTFLRLMATEASQNITYHCKNSVAYMDQATGNLKKALLLQGSNEIEIRAEGNSRFTYSVVEDGCTQHTGEWGKTVIDYKTTKTSRLPITDVAPMDIGAPDQEFGIDIGPVCFV	Refseq >NP_001080821\|collagen, type I, alpha 1 precursor [Xenopus laevis] MFSFVDTRTLLLIAATILVARCQGEHDVQTSDCVQHGITYSNRDVWKPEDCQICVCDNGNILCDEVMCEDADCPNPVIVPGECCPVCTDNDAQYSEVTGVEGPKGDVGPKGDKGIAGPPGRDGIPGQPGIPGPPGPPGPPGLGGNFAPQMSYGYDEKSAGISMPGPMGPMGPRGPPGPSGSPGPQGFQGPPGEPGEPGASGAMGPRGSSGPPGKNGEDGEAGKPGRPGERGPPGPQGARGLPGTAGLPGMKGHRGFNGLDGAKGDSGPAGPKGEPGSPGENGAPGQVGPRGLSGERGRPGPSGPAGARGNDGAPGAAGPPGSTGPSGPPGFPGGVGPKGDAGPQGSRGSDGPQGGRGEPGAPGQAGAAGPSGNPGSDGQPGAKGATGAPGIAGAPGFPGARGAPGAQGPGGSPGPKGNNGEPGAQGNKGEAGAKGEPGPAGVQGPPGPSGEEGKRGSRGEPGPAGPPGPAGERGGPGSRGFPGSDGASGPKGAPGERGPVGPAGPKGSSGESGRPGEPGLPGAKGLTGSPGSPGSDGKTGPAGAPGQDGRAGPPGPPGARGQSGVMGFPGPKGAAGEPGKNGEKGVAGPPGAVGLPGKDGDAGAQGPPGPAGPAGERGEQGPAGGPGFQGLPGPPGPAGESGKPGEQGVPGDVGPSGPAGARGERGFPGERGAQGPPGPQGARGSNGAPGNDGAKGEAGAAGAPGGQGPPGLQGMPGERGSSGLPGAKGDRGDQGVKGSDGTPGKDGVRGLTGPIGPPGPGGAPGDKGEAGPAGPAGPTGARGAPGERGESGPPGPAGFAGPPGADGQPGAKGEQGDSGAKGDAGPPGPAGPTGAPGPAGALGSPGPKGARGAPGPPGATGFPGAAGRLGPPGPSGNAGPPGPSGPAGKEGAKGPRGETGPAGRSGEPGAAGPPGPPGEKGSPGSDGPAGAPGIPGPQGVAGSRGTVGLPGMRGERGFSGLPGPAGEPGKQGPSGPSGERGPPGPSGPPGLGGPPGESGREGAPGSEGAPGRDGAVGPKGDRGEGGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPSGPAGPAGTAGARGPAGPQGPRGDKGEAGEQGERGMKGHRGFNGPSGPPGPPGSSGEQGPSGASGPAGPRGPPGSSGNPGKDGSNGLPGPIGPPGPRGRTGDVGPAGPPGPPGPPGPPGQSGGGFDFSFMPQPPQEKSHDGRFYRADDANVMRDRDLEVDSTLKSLSKQIENIRSPEGTRKNPARTCRDLKMCHSDWKSGEYWIDPNQGCILDAIKVYCNMETGETCIYPTQSSIPQKSWYTSKNLREKKHVWFGEAMSDGFQFEYGSEGSNSADVTIQLTFLRLMATEASQNITYHCKNSVAYMDQATGNLKKALLLQGSNEIEIRAEGNSRFTYSVVEDGCTQHTGEWGKTVIDYKTTKTSRLPITDVAPMDIGAPDQEFGIDIGPVCFV

Genomic		tropicalis
Genome Browser		Xenbase	Xenbase JGI Ensembl UCSC		Xenbase

Synteny

Expression		tropicalis	laevis
UniGene		Str.68477 [+] Str.10362 Str.25869 Str.46975 Str.53531 Str.69683 Str.77648 Str.77669 Str.78002 Str.83984	Xl.47042 [+] Xl.83677 Xl.85762
Unigene EST Profile		EST Profile	EST Profile
GEO data			GEO
Images		11 expression image(s) for tropicalis and laevis

Orthology		MOD	Entrez Gene	Genetic Phenotypes	Morphants
human		OMIM:Gene, HGNC	COL1A1
mouse		MGI	Col1a1	All(55) Targeted, knock Out(5) Targeted, other(29) Chemically Induced(2)
zebrafish		ZFIN ZFIN	col1a1b col1a1a	6 Lines(s)

Publications
First:		Retrovirus-induced interference with collagen I gene expression in Mov13 fibroblasts is maintained in the absence of DNA methylation. [Mol Cell Biol 1991]
Most recent:		Effects of fluoride on expression of bone-specific genes in developing Xenopus laevis larvae. [Biochem Cell Biol 2011]
		View All Papers

Functional Ontologies
GO: Molecular:
Biological:
Cellular Component:
EC:
KOG:

Reagents		tropicalis	laevis
Clones		open biosystems	open biosystems
		geneservice/RZPD imagenes	geneservice/RZPD imagenes
Affymetrix 1.0		Str.8427.1.S2_at [+] Str.8427.1.S1_at Str.10362.1.A1_at Str.17072.4.A1_at Str.17072.5.S1_at Str.25869.1.A1_at Str.46975.1.A1_at	Xl.26213.1.S1_at [+] Xl.26213.1.S2_at
Affymetrix 2.0			Xl2.47042.2.S2_a_at [+] Xl2.47042.1.S1_a_at

Symbol legend[+]